RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TMEM216Q9P0N5 145 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 HDGFL3Q9Y3E1 203 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 MON2Q7Z3U7 1717 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 KCPQ6ZWJ8 1503 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 IGKV3D-20A0A0C4DH25 116 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 NKX2-6A6NCS4 301 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SMIM9A6NGZ8 99 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 K7EQS6 105 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 PLIN3O60664 434 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 MAS1P04201 325 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 REG1AP05451 166 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SEC11BP0C7V7 166 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ALOX5APP20292 161 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 GADD45AP24522 165 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 IMPA1P29218 277 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 MIPP30301 263 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 REG1BP48304 166 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 LHX2P50458 406 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 CDK9P50750 372 aaKnown RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 NAA20P61599 178 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 DAD1P61803 113 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 OR2F1Q13607 317 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SLC9A3R2Q15599 337 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF239Q16600 458 aaKnown RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 N4BP2L1Q5TBK1 243 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SHISA6Q6ZSJ9 500 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 CLEC20AQ6ZU45 233 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 FAM19A3Q7Z5A8 133 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SLC35G3Q8N808 338 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZDHHC22Q8N966 263 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM161BQ8NDZ6 487 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 OR5H2Q8NGV7 314 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 OR5W2Q8NH69 310 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 OR5K1Q8NHB7 308 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZNRF2Q8NHG8 242 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 TNFAIP8L1Q8WVP5 186 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 CLDN23Q96B33 292 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF414Q96IQ9 312 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SLC35E1Q96K37 410 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 OR52B2Q96RD2 323 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 SCN2AQ99250 2005 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 RTBDNQ9BSG5 229 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 MARVELD1Q9BSK0 173 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 TSGA10Q9BZW7 698 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZSCAN16Q9H4T2 348 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF222Q9UK12 451 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 FBXO5Q9UKT4 447 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 MMACHCQ9Y4U1 282 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 ARL5AQ9Y689 179 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 RGPD8O14715 1765 aaPredicted RBP2.89□□□□□ -1.95
VPS13D-207ENST00000476169 PAPPAQ13219 1627 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 MRC1P22897 1456 aa2.89□□□□□ -1.95
VPS13D-207ENST00000476169 USP54Q70EL1 1684 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 ABCC12Q96J65 1359 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 NWD2Q9ULI1 1742 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 VWA8A3KMH1 1905 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 IGKV6-21A0A0C4DH24 114 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 IGHV3-64DA0A0J9YX35 117 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 A0A1B0GVX0 72 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 BTNL10A8MVZ5 291 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 TRIM49D1C9J1S8 452 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM238C9JI98 176 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 H0YJW9 148 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 K7EPK0 472 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 COPEO14579 308 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 FADS1O60427 444 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 YIF1AO95070 293 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 CXorf1O96002 111 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 IGLV1-47P01700 117 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 UCHL3P15374 230 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 RPS10P46783 165 aaKnown RBP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 ZNF83P51522 516 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 C1QTNF8P60827 252 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 SNAP25P60880 206 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 POLR2GP62487 172 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 GNB2P62879 340 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 PSG7Q13046 419 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 HENMT1Q5T8I9 393 aaKnown RBP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 ELP2Q6IA86 826 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 GLYATQ6IB77 296 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 HIST2H3AQ71DI3 136 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 TCF23Q7RTU1 214 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 AKAP14Q86UN6 197 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 ORMDL3Q8N138 153 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 NATD1Q8N6N6 113 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 Q8N976 141 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 OR10G2Q8NGC3 310 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 FAM57AQ8TBR7 257 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 SPPL2BQ8TCT7 592 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 C2orf15Q8WU43 125 aaKnown RBP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 RBMXL1Q96E39 390 aaKnown RBP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 TMA16Q96EY4 203 aaKnown RBP2.88□□□□□ -1.95
VPS13D-207ENST00000476169 FAM210BQ96KR6 192 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 OLFM3Q96PB7 478 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 DERL3Q96Q80 235 aa2.88□□□□□ -1.95
VPS13D-207ENST00000476169 RPP21Q9H633 154 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms