RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MTFP1Q9UDX5 166 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 V9GYH0 126 aa12.98□□□□□ -0.33
GPC1-207ENST00000466624 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 LEUTXA8MZ59 168 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 BET1O15155 118 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 GSTZ1O43708 216 aaPredicted RBP12.97□□□□□ -0.33
GPC1-207ENST00000466624 CEACAM3P40198 252 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 CEACAM6P40199 344 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 GNG10P50151 68 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 RAB7AP51149 207 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 ZNF134P52741 427 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 ARPC4P59998 168 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 CT45A1Q5HYN5 189 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
GPC1-207ENST00000466624 OR2AK2Q8NG84 335 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 OR5AP2Q8NGF4 316 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 OR52I2Q8NH67 350 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 CT45A3Q8NHU0 189 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 MEGF9Q9H1U4 602 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 GHITMQ9H3K2 345 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 OR1A1Q9P1Q5 309 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
GPC1-207ENST00000466624 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
GPC1-207ENST00000466624 OOSP1A8MZH6 123 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 LY6LH3BQJ8 138 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 SLC31A2O15432 143 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 RBBP9O75884 186 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 IGHV3-7P01780 117 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 IL3RAP26951 378 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 ZNF137PP52743 207 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 TAS2R46P59540 309 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 DEFB112Q30KQ8 113 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 LDLRAD2Q5SZI1 272 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 LHFPL4Q7Z7J7 247 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 LDLRAD3Q86YD5 345 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 H1FOOQ8IZA3 346 aaPredicted RBP12.96□□□□□ -0.33
GPC1-207ENST00000466624 OR10X1Q8NGY0 326 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 C22orf15Q8WYQ4 148 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 SLC6A7Q99884 636 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 NECAP2Q9NVZ3 263 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 RDH8Q9NYR8 311 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 ZNRD1Q9P1U0 126 aa12.96□□□□□ -0.33
GPC1-207ENST00000466624 RBMX2Q9Y388 322 aaKnown RBP12.96□□□□□ -0.33
GPC1-207ENST00000466624 A0A1W2PPE3 182 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 DGCR2P98153 550 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 CDK10Q15131 360 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 AANATQ16613 207 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 ZNF418Q8TF45 676 aaPredicted RBP12.95□□□□□ -0.34
GPC1-207ENST00000466624 ZNF48Q96MX3 618 aaPredicted RBP12.95□□□□□ -0.34
GPC1-207ENST00000466624 AGMATQ9BSE5 352 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
GPC1-207ENST00000466624 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
GPC1-207ENST00000466624 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 TUSC2O75896 110 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 TBPP20226 339 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 ZNF45Q02386 682 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 ZNF79Q15937 498 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 FAM71F2Q6NXP2 309 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
GPC1-207ENST00000466624 Q6YL49 198 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 OVCH2Q7RTZ1 564 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 C17orf50Q8WW18 174 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 ST6GALNAC6Q969X2 333 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 C11orf54Q9H0W9 315 aaPredicted RBP12.94□□□□□ -0.34
GPC1-207ENST00000466624 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 TAS2R8Q9NYW2 309 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
GPC1-207ENST00000466624 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 TXNL1O43396 289 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 OR5H8P0DN80 308 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 OR3A3P47888 321 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 DYNLT3P51808 116 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 ARHGDIBP52566 201 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 ZNF816Q0VGE8 651 aaPredicted RBP12.93□□□□□ -0.34
GPC1-207ENST00000466624 DYRK1AQ13627 763 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 SSX2Q16385 188 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 RNASE12Q5GAN4 147 aaKnown RBP12.93□□□□□ -0.34
GPC1-207ENST00000466624 ODF3L1Q8IXM7 274 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 LYG1Q8N1E2 194 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 DYNAPQ8N1N2 210 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 SIGLECL1Q8N7X8 197 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 TMEM229BQ8NBD8 167 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 OR5H2Q8NGV7 314 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 GIMAP1Q8WWP7 306 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 RPEQ96AT9 228 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 SRRQ9GZT4 340 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
GPC1-207ENST00000466624 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 OR2W1Q9Y3N9 320 aa12.93□□□□□ -0.34
GPC1-207ENST00000466624 NIPBLQ6KC79 2804 aaeCLIP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms