RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DTX3Q8N9I9 347 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 OR2AK2Q8NG84 335 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 CT45A3Q8NHU0 189 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 YIPF6Q96EC8 236 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 RBM14Q96PK6 669 aaKnown RBP10.31□□□□□ -0.76
COL5A1-206ENST00000465877 PRSS22Q9GZN4 317 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 MGAT4AQ9UM21 535 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 KCNK7Q9Y2U2 307 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 MGAM2Q2M2H8 2515 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 METTL21EPA6NDL7 271 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 AIREO43918 545 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 YPEL1O60688 119 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 FCGR3AP08637 254 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 CD3GP09693 182 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 FAM106CPP0CH98 169 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 SMIM18P0DKX4 95 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 SNRPBP14678 240 aaKnown RBP10.3□□□□□ -0.76
COL5A1-206ENST00000465877 GNB3P16520 340 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 TMEM11P17152 192 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 TGFBR1P36897 503 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 VDAC2P45880 294 aaPredicted RBP10.3□□□□□ -0.76
COL5A1-206ENST00000465877 BLCAPP62952 87 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 MRPS15P82914 257 aaKnown RBP10.3□□□□□ -0.76
COL5A1-206ENST00000465877 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
COL5A1-206ENST00000465877 LY6G6FQ5SQ64 297 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 Q6ZS46 218 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 TGIF2LXQ8IUE1 241 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 LYG1Q8N1E2 194 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 YPEL2Q96QA6 119 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 ATG5Q9H1Y0 275 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 IFI27L2Q9H2X8 130 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 Q9N2K0 584 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
COL5A1-206ENST00000465877 SAA2-SAA4A0A096LPE2 208 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 IGHV3-72A0A0B4J1Y9 119 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 M0QZK8 103 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 SAA2P0DJI9 122 aaPredicted RBP10.29□□□□□ -0.76
COL5A1-206ENST00000465877 VSIG10L2P0DP72 767 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 SCAND1P57086 179 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 ABCA11PQ4W5N1 156 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 THNSL2Q86YJ6 484 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 ODF3L1Q8IXM7 274 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 RHBDL2Q9NX52 303 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 OR1A1Q9P1Q5 309 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 SLC23A1Q9UHI7 598 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 ETV7Q9Y603 341 aa10.29□□□□□ -0.76
COL5A1-206ENST00000465877 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
COL5A1-206ENST00000465877 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 HSPA12AO43301 675 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 LANCL1O43813 399 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 SCGNO76038 276 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 AMY1AP04745 511 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 AMY2AP04746 511 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 IDNKQ5T6J7 187 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 ZNF833PQ6ZTB9 187 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 SLC25A38Q96DW6 304 aa10.28□□□□□ -0.76
COL5A1-206ENST00000465877 PARP12Q9H0J9 701 aaKnown RBP10.28□□□□□ -0.76
COL5A1-206ENST00000465877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL5A1-206ENST00000465877 IGKV1-6A0A0C4DH72 117 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 FGF16O43320 207 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 PEX14O75381 377 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 SCTP09683 121 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 ZBTB25P24278 435 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 LSM3P62310 102 aaKnown RBP10.27□□□□□ -0.77
COL5A1-206ENST00000465877 LSAMPQ13449 338 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 ARFRP1Q13795 201 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 EBI3Q14213 229 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 HNF4GQ14541 408 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 KIR2DS1Q14954 304 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 ARL6IP1Q15041 203 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 Q8N6K4 173 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 OR4A4PQ8NGN8 299 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 OR13F1Q8NGS4 319 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 OR5H6Q8NGV6 325 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 MAFIPQ8WZ33 124 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.77
COL5A1-206ENST00000465877 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
COL5A1-206ENST00000465877 MRPL20Q9BYC9 149 aaKnown RBP10.27□□□□□ -0.77
COL5A1-206ENST00000465877 ELF5Q9UKW6 265 aaPredicted RBP10.27□□□□□ -0.77
COL5A1-206ENST00000465877 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 ZNF736B4DX44 427 aaPredicted RBP10.26□□□□□ -0.77
COL5A1-206ENST00000465877 TRDCB7Z8K6 153 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 M0QZ24 198 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 ITGB1BP1O14713 200 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 FABP7O15540 132 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 FBXO24O75426 580 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 CD1BP29016 333 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 OR3A3P47888 321 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
COL5A1-206ENST00000465877 WIPF2Q8TF74 440 aaPredicted RBP10.26□□□□□ -0.77
COL5A1-206ENST00000465877 NABP2Q9BQ15 211 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms