RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF367Q7RTV3 350 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 FOXRED2Q8IWF2 684 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 ODF3L1Q8IXM7 274 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 STPG2Q8N412 459 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 WFDC9Q8NEX5 89 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 OR8H1Q8NGG4 311 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 PHF21AQ96BD5 680 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 YPEL2Q96QA6 119 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 ACOT13Q9NPJ3 140 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 PLEKHJ1Q9NW61 149 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 BLOC1S6Q9UL45 172 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 LRRC42Q9Y546 428 aa14.93□□□□□ -0.02
COL5A1-203ENST00000460264 SOCS1O15524 211 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 RGS11O94810 467 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 LY6G6FQ5SQ64 297 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 MOB1BQ7L9L4 216 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 FAM89BQ8N5H3 189 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 FAM71E2Q8N5Q1 922 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 S1PR3Q99500 378 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 URM1Q9BTM9 101 aaKnown RBP14.92□□□□□ -0.02
COL5A1-203ENST00000460264 CHMP1AQ9HD42 196 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-203ENST00000460264 ABRACLQ9P1F3 81 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 RAB26Q9ULW5 256 aa14.92□□□□□ -0.02
COL5A1-203ENST00000460264 FOXI3A8MTJ6 420 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-203ENST00000460264 AP4M1O00189 453 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 F2RL1P55085 397 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 CLDN12P56749 244 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 RPL23AP62750 156 aaKnown RBP14.91□□□□□ -0.02
COL5A1-203ENST00000460264 SLC35B1P78383 322 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 SSX1Q16384 188 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 OR2AK2Q8NG84 335 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 OR51D1Q8NGF3 324 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 IL1F10Q8WWZ1 152 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 HDHD3Q9BSH5 251 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-203ENST00000460264 MRPL20Q9BYC9 149 aaKnown RBP14.91□□□□□ -0.02
COL5A1-203ENST00000460264 AK3Q9UIJ7 227 aa14.91□□□□□ -0.02
COL5A1-203ENST00000460264 SAA2-SAA4A0A096LPE2 208 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 TRBV6-6A0A0A6YYG2 114 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 SAA2P0DJI9 122 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-203ENST00000460264 IGLL1P15814 213 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 OR3A3P47888 321 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 ZNF833PQ6ZTB9 187 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 REC114Q7Z4M0 266 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 COMMD1Q8N668 190 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 SETD6Q8TBK2 473 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 RASL11BQ9BPW5 248 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 HSPB9Q9BQS6 159 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 IFI27L2Q9H2X8 130 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 RIMS4Q9H426 269 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-203ENST00000460264 HSF4Q9ULV5 492 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 V9GY05 133 aa14.9□□□□□ -0.02
COL5A1-203ENST00000460264 ATP6V1G2O95670 118 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 ETV3LQ6ZN32 361 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 FAM3DQ96BQ1 224 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 NABP2Q9BQ15 211 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 C12orf4Q9NQ89 552 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 NECAP2Q9NVZ3 263 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 NDUFB11Q9NX14 153 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 STEAP1Q9UHE8 339 aa14.89□□□□□ -0.03
COL5A1-203ENST00000460264 LDLRAD4O15165 306 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 SOX6P35712 828 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 VEGFCP49767 419 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 PSMD7P51665 324 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 GABARAPL2P60520 117 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 HLA-DRB3P79483 266 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 MMDQ15546 238 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 CD200R1LQ6Q8B3 271 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 C18orf65Q6ZTR6 163 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 LINC00482Q8N8I6 264 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 ARHGAP5-AS1Q96IT6 56 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 PARP12Q9H0J9 701 aaKnown RBP14.88□□□□□ -0.03
COL5A1-203ENST00000460264 ZFP57Q9NU63 452 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 DNAH3Q8TD57 4116 aa14.88□□□□□ -0.03
COL5A1-203ENST00000460264 SHISA3A0PJX4 238 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 ST8SIA5O15466 376 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 SLC6A1P30531 599 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 TMEM50BP56557 158 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 ACTBP60709 375 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 C2orf76Q3KRA6 126 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 HES5Q5TA89 166 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 FOXB2Q5VYV0 432 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 FAM71F2Q6NXP2 309 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 TEX38Q6PEX7 206 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 C8orf86Q6ZUL3 223 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 KLHL30-AS1Q8NEE0 82 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 RCC1LQ96I51 464 aaKnown RBP14.87□□□□□ -0.03
COL5A1-203ENST00000460264 GON7Q9BXV9 100 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 PECRQ9BY49 303 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 SLC23A1Q9UHI7 598 aa14.87□□□□□ -0.03
COL5A1-203ENST00000460264 TRAV1-2A0A0B4J238 106 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 TMEM272A0A1B0GTI8 110 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 NUDT19A8MXV4 375 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 DENRO43583 198 aaKnown RBP14.86□□□□□ -0.03
COL5A1-203ENST00000460264 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
COL5A1-203ENST00000460264 SLC2A2P11168 524 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-203ENST00000460264 RANBP1P43487 201 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 THBS3P49746 956 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 OR10A3P58181 314 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 CFHR3Q02985 330 aa14.86□□□□□ -0.03
COL5A1-203ENST00000460264 PLA2G7Q13093 441 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms