RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 RCC1P18754 421 aaPredicted RBP5.55□□□□□ -1.52
VPS41-208ENST00000448833 PSMB8P28062 276 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 ZNF134P52741 427 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 ADARB1P78563 741 aaKnown RBP5.55□□□□□ -1.52
VPS41-208ENST00000448833 RUNX1Q01196 453 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 TMEM267Q0VDI3 215 aaPredicted RBP5.55□□□□□ -1.52
VPS41-208ENST00000448833 LSAMPQ13449 338 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 MMDQ15546 238 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 LRRC36Q1X8D7 754 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 RNLSQ5VYX0 342 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 PYHIN1Q6K0P9 492 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 LIN54Q6MZP7 749 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 MOB1BQ7L9L4 216 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 TCTEX1D1Q8N7M0 179 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 NANOGP1Q8N7R0 232 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 ZNF485Q8NCK3 441 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 TFAP2CQ92754 450 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 RAX2Q96IS3 184 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 KCTD7Q96MP8 289 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 RNF5Q99942 180 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 ABHD14AQ9BUJ0 271 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 MND1Q9BWT6 205 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 BANF2Q9H503 90 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 SCN3BQ9NY72 215 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 PSORS1C1Q9UIG5 152 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 RNF150Q9ULK6 438 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 VSIG4Q9Y279 399 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 SORL1Q92673 2214 aa5.55□□□□□ -1.52
VPS41-208ENST00000448833 A0A1W2PPK0 400 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 UBE2QL1A1L167 161 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 LINC01548A6NM66 108 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 SEC14L6B5MCN3 397 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ITGB1BP1O14713 200 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 NBR2O15453 112 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 RBBP9O75884 186 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 LALBAP00709 142 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 HLA-DRB1P01911 266 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 SRMP19623 302 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 VHLP40337 213 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 PSMD7P51665 324 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 F2RL1P55085 397 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ACTBP60709 375 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 CFHR3Q02985 330 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ZNF616Q08AN1 781 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 TRAM1Q15629 374 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ACSM3Q53FZ2 586 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 FAM27D1Q5T7N8 215 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ZNF660Q6AZW8 331 aaPredicted RBP5.54□□□□□ -1.52
VPS41-208ENST00000448833 ZNF833PQ6ZTB9 187 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 AHSA2Q719I0 299 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ZNF429Q86V71 674 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 ZFP41Q8N8Y5 198 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 NPBQ8NG41 125 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 OR10V1Q8NGI7 309 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 OR13C5Q8NGS8 318 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 OR1L1Q8NH94 360 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 UBALD1Q8TB05 177 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 EDARADDQ8WWZ3 215 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 URM1Q9BTM9 101 aaKnown RBP5.54□□□□□ -1.52
VPS41-208ENST00000448833 CENPOQ9BU64 300 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 TMEM59Q9BXS4 323 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 OR51J1Q9H342 316 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 PLEKHJ1Q9NW61 149 aa5.54□□□□□ -1.52
VPS41-208ENST00000448833 TRAV41A0A0B4J266 112 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 PNMA8CA0A1B0GUJ8 204 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 MAGEA13PA6NCF6 341 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 OR5H14A6NHG9 310 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 ZNF736B4DX44 427 aaPredicted RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 SLC31A2O15432 143 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 ARL6IP5O75915 188 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 IGLV1-40P01703 118 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 ZBTB25P24278 435 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 PSMA1P25786 263 aaKnown RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 CHATP28329 748 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 HTR2CP28335 458 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 PPIFP30405 207 aaKnown RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 ECI1P42126 302 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 RAB9AP51151 201 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 RPS27AP62979 156 aaKnown RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 GABPB1Q06547 395 aaPredicted RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 FHL3Q13643 280 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 PLGLAQ15195 96 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 SPHARQ15513 63 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 C5orf64Q2M2E5 130 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 HSD17B12Q53GQ0 312 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 NKAPLQ5M9Q1 402 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 C1orf100Q5SVJ3 147 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 LYPD6Q86Y78 171 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 ZNF491Q8N8L2 437 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 BPIFB6Q8NFQ5 453 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 OR11H1Q8NG94 326 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 OR6M1Q8NGM8 313 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 OR1N2Q8NGR9 330 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 MRPL30Q8TCC3 161 aaKnown RBP5.53□□□□□ -1.52
VPS41-208ENST00000448833 MYOZ3Q8TDC0 251 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 IL1F10Q8WWZ1 152 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 FAM46BQ96A09 425 aa5.53□□□□□ -1.52
VPS41-208ENST00000448833 ORAI1Q96D31 301 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms