RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CLDN15P56746 228 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 MRPS6P82932 125 aaKnown RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TGFBR3Q03167 851 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 IL10RBQ08334 325 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TCF15Q12870 199 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 PSG7Q13046 419 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM183BQ1AE95 376 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 IZUMO4Q1ZYL8 232 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A35Q3KQZ1 300 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TIGITQ495A1 244 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 PRR30Q53SZ7 412 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CT45A2Q5DJT8 189 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR10K2Q6IF99 312 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TNFAIP8L2Q6P589 184 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A48Q6ZT89 311 aaKnown RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A26Q70HW3 274 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM219Q86XT9 240 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 C1orf158Q8N1D5 194 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TTC9CQ8N5M4 171 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM178AQ8NBL3 297 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR2T12Q8NG77 320 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR11H7Q8NGC8 314 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR51T1Q8NGJ9 327 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR2T27Q8NH04 317 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 MBD3L1Q8WWY6 194 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM37Q8WXS4 190 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TSLPQ969D9 159 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CLDN23Q96B33 292 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 UPRTQ96BW1 309 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 DDIT4LQ96D03 193 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZMYND19Q96E35 227 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 LRRC61Q9BV99 259 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF471Q9BX82 626 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A39Q9BZJ4 359 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 NPFFR1Q9GZQ6 430 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 POLR2J3Q9H1A7 115 aaKnown RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR2D2Q9H210 308 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 BANF2Q9H503 90 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 PRTFDC1Q9NRG1 225 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 C1orf123Q9NWV4 160 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SIGLEC8Q9NYZ4 499 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 DNAJC27Q9NZQ0 273 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 HIGD1AQ9Y241 93 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMED7Q9Y3B3 224 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 HDGFL3Q9Y3E1 203 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 V9GYH0 126 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 ATAD5Q96QE3 1844 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 OTOFQ9HC10 1997 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 LOC102724200A0A096LPH7 203 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 TSPAN11A1L157 253 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CEACAM18A8MTB9 384 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM150CB9EJG8 249 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 ADM5C9JUS6 153 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 H0YJW9 148 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 STK17BO94768 372 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 KLF8O95600 359 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CD8AP01732 235 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CATP04040 527 aaKnown RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 SCTP09683 121 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC35G6P0C7Q6 338 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF728P0DKX0 622 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 IGFBP3P17936 291 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CXCL2P19875 107 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 NFYAP23511 347 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 FOXA1P55317 472 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 FKBP1AP62942 108 aaKnown RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 MEF2CQ06413 473 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 RAB40BQ12829 278 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 MELKQ14680 651 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 BATFQ16520 125 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 TP53I3Q53FA7 332 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 SPANXN3Q5MJ09 141 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 BCL2L15Q5TBC7 163 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 OLFML2AQ68BL7 652 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CNIH2Q6PI25 160 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A47Q6Q0C1 308 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 UNQ5815/PRO19632Q6UWF5 114 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 APOOLQ6UXV4 268 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 PIP4P1Q86T03 277 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 CDC20BQ86Y33 519 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF440Q8IYI8 595 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 PRELID2Q8N945 189 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 GJC3Q8NFK1 279 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR10G7Q8NGN6 311 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR1J1Q8NGS3 322 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 NEIL3Q8TAT5 605 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 FNDC9Q8TBE3 224 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 PIFOQ8TCI5 191 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 GATAD1Q8WUU5 269 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 PSMF1Q92530 271 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM18Q96B42 140 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 PCED1BQ96HM7 432 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 LINC00477Q96M19 166 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR51E2Q9H255 320 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 FGF20Q9NP95 211 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 ACOT13Q9NPJ3 140 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 ACER3Q9NUN7 267 aa3.95□□□□□ -1.78
HMGB3P9-201ENST00000441799 LOXHD1Q8IVV2 1947 aa3.94□□□□□ -1.78
HMGB3P9-201ENST00000441799 A0A0B4J2A0 478 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms