RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 VAX1Q5SQQ9 334 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 ASPHD1Q5U4P2 390 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 RNLSQ5VYX0 342 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 NKAIN3Q8N8D7 197 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 NRG4Q8WWG1 115 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 YPEL2Q96QA6 119 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 ABHD14AQ9BUJ0 271 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 SCOCQ9UIL1 159 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 ERGIC3Q9Y282 383 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 WSB1Q9Y6I7 421 aa13.33□□□□□ -0.28
CPSF4-203ENST00000430038 SORL1Q92673 2214 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TENM3Q9P273 2699 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 IGHV7-81A0A0B4J1V7 117 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM14DPA8MWL7 114 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TXNL1O43396 289 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 NAPSAO96009 420 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 ELANEP08246 267 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-203ENST00000430038 SRMP19623 302 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 SLC6A1P30531 599 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 RAB25P57735 213 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 ACTBP60709 375 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM30BQ3MIR4 351 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 ZNF880Q6PDB4 577 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TRAT1Q6PIZ9 186 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM91Q6ZNR0 172 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 ZNF833PQ6ZTB9 187 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 OR8H1Q8NGG4 311 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 HDHD3Q9BSH5 251 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-203ENST00000430038 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 ANKRD60Q9BZ19 345 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 GNB4Q9HAV0 340 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
CPSF4-203ENST00000430038 HUWE1Q7Z6Z7 4374 aaKnown RBP13.31□□□□□ -0.28
CPSF4-203ENST00000430038 SLC22A1O15245 554 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 SOCS1O15524 211 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 PROP1O75360 226 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 NDPQ00604 133 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 FHL3Q13643 280 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 SPHARQ15513 63 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 MMDQ15546 238 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 CXorf66Q5JRM2 361 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-203ENST00000430038 CEACAM19Q7Z692 300 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 ZNF554Q86TJ5 538 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM203Q969S6 136 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 KCNIP1Q9NZI2 227 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 GHRLQ9UBU3 117 aa13.31□□□□□ -0.28
CPSF4-203ENST00000430038 FOXI3A8MTJ6 420 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-203ENST00000430038 ATP6V0E1O15342 81 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 UCHL1P09936 223 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 MAPK3P27361 379 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-203ENST00000430038 LINC00205P59089 165 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 C19orf54Q5BKX5 351 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 RBM48Q5RL73 367 aaKnown RBP13.3□□□□□ -0.28
CPSF4-203ENST00000430038 LY6G6FQ5SQ64 297 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 SVOPQ8N4V2 548 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 MS4A15Q8N5U1 240 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 ZNF491Q8N8L2 437 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 GALMQ96C23 342 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 NEDD4LQ96PU5 975 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 B9D2Q9BPU9 175 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 MCRIP2Q9BUT9 160 aaKnown RBP13.3□□□□□ -0.28
CPSF4-203ENST00000430038 MND1Q9BWT6 205 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 CST11Q9H112 138 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 LPAR5Q9H1C0 372 aa13.3□□□□□ -0.28
CPSF4-203ENST00000430038 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
CPSF4-203ENST00000430038 I3L521 148 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 FCN1O00602 326 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 SOX15O60248 233 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 CT45A6P0DMU7 189 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 CT45A5P0DMU8 189 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 CT45A7P0DMV0 189 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 VDAC1P21796 283 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-203ENST00000430038 AQP4P55087 323 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM50BP56557 158 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 RPS25P62851 125 aaKnown RBP13.29□□□□□ -0.28
CPSF4-203ENST00000430038 PLA2G7Q13093 441 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 C5orf64Q2M2E5 130 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 LIPKQ5VXJ0 399 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 GLDNQ6ZMI3 551 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-203ENST00000430038 NPBQ8NG41 125 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 CASTOR1Q8WTX7 329 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 IL1F10Q8WWZ1 152 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 PHYHIPQ92561 330 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 PRR25Q96S07 402 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 AGMATQ9BSE5 352 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 TMEM59Q9BXS4 323 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 GON7Q9BXV9 100 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 OR51J1Q9H342 316 aa13.29□□□□□ -0.28
CPSF4-203ENST00000430038 RAB9BQ9NP90 201 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms