RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RAB2AP61019 212 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 NAA20P61599 178 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 RPS11P62280 158 aaKnown RBP eCLIP1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 GTF2BQ00403 316 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 FLI1Q01543 452 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 IFITM2Q01629 132 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ELOCQ15369 112 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 SP6Q3SY56 376 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TTMPQ5BVD1 217 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 UBE2NLQ5JXB2 153 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 HACD4Q5VWC8 232 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TNFAIP8L2Q6P589 184 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 NT5DC3Q86UY8 548 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 PDPNQ86YL7 162 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 DOLPP1Q86YN1 238 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR6V1Q8N148 313 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CLDN22Q8N7P3 220 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM75Q8N9X5 138 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2T4Q8NH00 348 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2V1Q8NHB1 315 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ORAOV1Q8WV07 137 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 MAL2Q969L2 176 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 YIPF5Q969M3 257 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OPTNQ96CV9 577 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OLFM3Q96PB7 478 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 DERL3Q96Q80 235 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ANAPC13Q9BS18 74 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TSSK6Q9BXA6 273 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 MS4A8Q9BY19 250 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TLNRD1Q9H1K6 362 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 LINC00574Q9H8X3 128 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 PARVAQ9NVD7 372 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM38BQ9NVV0 291 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF230Q9UIE0 474 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF780BQ9Y6R6 833 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCDC144AA2RUR9 1427 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 PLCH2O75038 1416 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR6C6A6NF89 314 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 C4orf51C9J302 202 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 PGRMC1O00264 195 aaKnown RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 COX7A2P2O60397 106 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 GATBO75879 557 aaKnown RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 TNNC2P02585 160 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 IL3P08700 152 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 LINC00614P0C842 121 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 CD28P10747 220 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 NTF3P20783 257 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 OMPP47874 163 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 ERFP50548 548 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 RAP1GDS1P52306 607 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 H2BFSP57053 126 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM33P57088 247 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 LINC00313P59037 77 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 RUNX1Q01196 453 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 JOSD1Q15040 202 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC9A3R2Q15599 337 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 ATP6AP1LQ52LC2 224 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPL2Q5T653 305 aaKnown RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 SPOPLQ6IQ16 392 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 LCN8Q6JVE9 175 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 FA2HQ7L5A8 372 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 OLIG3Q7RTU3 272 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 NIT1Q86X76 327 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF567Q8N184 647 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 LRRC25Q8N386 305 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR10X1Q8NGY0 326 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 TWIST2Q8WVJ9 160 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 CYGBQ8WWM9 190 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 EBNA1BP2Q99848 306 aaKnown RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 SELENOSQ9BQE4 189 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 ULBP1Q9BZM6 244 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 PAQR5Q9NXK6 330 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 VPREB3Q9UKI3 123 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR51B4Q9Y5P0 310 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 VWA8A3KMH1 1905 aa1.85□□□□□ -2.11
HMGB1P49-201ENST00000418882 DNMT1P26358 1616 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 ATRNO75882 1429 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 K7EQS6 105 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 M0QYV0 167 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 EIF1BO60739 113 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 CIAO1O76071 339 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 KRT75O95678 551 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR4E1P0C645 316 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 NELFEP18615 380 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCL1P22362 96 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 EIF1P41567 113 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC35A2P78381 396 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM267Q0VDI3 215 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 GUK1Q16774 197 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF678Q5SXM1 525 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 C1orf194Q5T5A4 169 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 HENMT1Q5T8I9 393 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 LAIR2Q6ISS4 152 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 MORN3Q6PF18 240 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCDC121Q6ZUS5 278 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 LYG2Q86SG7 212 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF664Q8N3J9 261 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms