RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NBPF19A0A087WUL8 3843 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PQLC2LA1A4F0 135 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 SMIM30A4D0T7 59 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 GGT3PA6NGU5 568 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ZNF850A8MQ14 1090 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 E7EQL1 145 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 AIPO00170 330 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 SLC17A2O00624 439 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PDCD5O14737 125 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 CASKO14936 926 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 CTDSPLO15194 276 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ST8SIA3O43173 380 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PTBP3O95758 552 aaKnown RBP3.29□□□□□ -1.88
CLK1-203ENST00000409769 NRASP01111 189 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 MAS1P04201 325 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PRKACBP22694 351 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ALDH3B1P43353 468 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 EVX1P49640 407 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 RORCP51449 518 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PSMD7P51665 324 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 KRTAP10-8P60410 259 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 RPS23P62266 143 aaKnown RBP3.29□□□□□ -1.88
CLK1-203ENST00000409769 PPP3R1P63098 170 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 QRFPP83859 136 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PRDX4Q13162 271 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 DGUOKQ16854 277 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 CEACAM21Q3KPI0 293 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ZNF404Q494X3 552 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 AGAP6Q5VW22 663 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 GLT8D1Q68CQ7 371 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ASCL4Q6XD76 172 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 C17orf107Q6ZR85 190 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 LINC00299Q6ZSB3 139 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 WDR86Q86TI4 376 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 LRP11Q86VZ4 500 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 OR8H3Q8N146 312 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 FTMTQ8N4E7 242 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 OR8G5Q8NG78 346 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 OR4D6Q8NGJ1 314 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 OR6Q1Q8NGQ2 317 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 OR5P3Q8WZ94 311 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PIGCQ92535 297 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 TECTBQ96PL2 329 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 UQCC2Q9BRT2 126 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 MRPL37Q9BZE1 423 aaKnown RBP3.29□□□□□ -1.88
CLK1-203ENST00000409769 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 TPK1Q9H3S4 243 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 METTL17Q9H7H0 456 aaPredicted RBP3.29□□□□□ -1.88
CLK1-203ENST00000409769 SRD5A3Q9H8P0 318 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 PLEKHA1Q9HB21 404 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 ABRACLQ9P1F3 81 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 RNF115Q9Y4L5 304 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 MPC1Q9Y5U8 109 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 DOCK11Q5JSL3 2073 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 DSCAML1Q8TD84 2053 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 LRRK2Q5S007 2527 aa3.29□□□□□ -1.88
CLK1-203ENST00000409769 UBR5O95071 2799 aaPredicted RBP3.29□□□□□ -1.88
CLK1-203ENST00000409769 USF3Q68DE3 2245 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 IGKV1-12A0A0C4DH73 117 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 ZSCAN5BA6NJL1 495 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 OR5B21A6NL26 309 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 TMEM210A6NLX4 147 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 ANKRD30BLA7E2S9 258 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 SRRM4A7MD48 611 aaKnown RBP3.28□□□□□ -1.88
CLK1-203ENST00000409769 TMEM14DPA8MWL7 114 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 H0YL77 283 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 J3QKU1 62 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 CCSO14618 274 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 TIMM8AO60220 97 aaPredicted RBP3.28□□□□□ -1.88
CLK1-203ENST00000409769 CLPXO76031 633 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 GOSR1O95249 250 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 PAHP00439 452 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 IGKV1D-12P01611 117 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 ERCC1P07992 297 aaPredicted RBP3.28□□□□□ -1.88
CLK1-203ENST00000409769 CD55P08174 381 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 OR4A8P0C604 315 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 CALCBP10092 127 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 HTR2CP28335 458 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 SOX6P35712 828 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 ZNF93P35789 620 aaPredicted RBP3.28□□□□□ -1.88
CLK1-203ENST00000409769 ETV6P41212 452 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 CD200P41217 278 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 OR3A4PP47883 348 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 FABP6P51161 128 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 CLDN12P56749 244 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 KLF3P57682 345 aaPredicted RBP3.28□□□□□ -1.88
CLK1-203ENST00000409769 ZNF154Q13106 437 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 MAB21L1Q13394 359 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 UNC119Q13432 240 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 KISS1Q15726 138 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 SPRNQ5BIV9 151 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 DMRTC1Q5HYR2 192 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 IDNKQ5T6J7 187 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 HES5Q5TA89 166 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 DDI2Q5TDH0 399 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 PLCXD3Q63HM9 321 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 C11orf71Q6IPW1 123 aa3.28□□□□□ -1.88
CLK1-203ENST00000409769 BIVMQ86UB2 503 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms