RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PPP1CCP36873 323 aaKnown RBP12.67□□□□□ -0.38
CHMP3-203ENST00000409225 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 KLF5Q13887 457 aaPredicted RBP12.67□□□□□ -0.38
CHMP3-203ENST00000409225 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 ZNF529Q6P280 563 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 Q8N402 240 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 LFNGQ8NES3 379 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 OR52L2PQ8NGH6 319 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 CLCC1Q96S66 551 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 S100A13Q99584 98 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 CIB1Q99828 191 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 PDCD1LG2Q9BQ51 273 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 ST6GALNAC5Q9BVH7 336 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 SLA2Q9H6Q3 261 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 ZNF355PQ9NSJ1 428 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 C13orf42A0A1B0GVH6 325 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 A0A1W2PP11 408 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-203ENST00000409225 SOX2P48431 317 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 CD81P60033 236 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 AKIRIN2Q53H80 203 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 FAM131AQ6UXB0 335 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 C5orf24Q7Z6I8 188 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 MRPS24Q96EL2 167 aaKnown RBP12.66□□□□□ -0.38
CHMP3-203ENST00000409225 ADAM30Q9UKF2 790 aa12.66□□□□□ -0.38
CHMP3-203ENST00000409225 KIAA1109Q2LD37 5005 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 TMEM212A6NML5 194 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 CSN3P07498 182 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-203ENST00000409225 PMS2P11Q13670 270 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
CHMP3-203ENST00000409225 ACBD7Q8N6N7 88 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 ISG20L2Q9H9L3 353 aaKnown RBP12.65□□□□□ -0.38
CHMP3-203ENST00000409225 TAF9BQ9HBM6 251 aa12.65□□□□□ -0.38
CHMP3-203ENST00000409225 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 E9PI62 339 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 TPPPO94811 219 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 CNIH1O95406 144 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 TFAP2AP05549 437 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 RPSAP08865 295 aaKnown RBP12.64□□□□□ -0.39
CHMP3-203ENST00000409225 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
CHMP3-203ENST00000409225 ZNF93P35789 620 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-203ENST00000409225 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 DDI2Q5TDH0 399 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 ZDHHC13Q8IUH4 622 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 RGP1Q92546 391 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-203ENST00000409225 NEURL2Q9BR09 285 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 ALG8Q9BVK2 526 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 JAM3Q9BX67 310 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 GABARAPL1Q9H0R8 117 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
CHMP3-203ENST00000409225 PAK1IP1Q9NWT1 392 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-203ENST00000409225 GTF2F2P13984 249 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 GNGT1P63211 74 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 ATP6AP1Q15904 470 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 GLDNQ6ZMI3 551 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-203ENST00000409225 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
CHMP3-203ENST00000409225 SRD5A3Q9H8P0 318 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
CHMP3-203ENST00000409225 JPT1Q9UK76 154 aa12.63□□□□□ -0.39
CHMP3-203ENST00000409225 FADS2O95864 444 aaKnown RBP12.62□□□□□ -0.39
CHMP3-203ENST00000409225 CA2P00918 260 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
CHMP3-203ENST00000409225 CD7P09564 240 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 DEFA5Q01523 94 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 GAPTQ8N292 157 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 POC5Q8NA72 575 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 OR5T1Q8NG75 326 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 GRPEL2Q8TAA5 225 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 CYYR1Q96J86 154 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 IMPAD1Q9NX62 359 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 KCNIP1Q9NZI2 227 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 METTL1Q9UBP6 276 aaKnown RBP12.62□□□□□ -0.39
CHMP3-203ENST00000409225 PEX16Q9Y5Y5 336 aa12.62□□□□□ -0.39
CHMP3-203ENST00000409225 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 ZNF780AO75290 641 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-203ENST00000409225 MAS1P04201 325 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 PPP3R1P63098 170 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 MOGAT2Q3SYC2 334 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 ZNF562Q6V9R5 426 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 OR2AK2Q8NG84 335 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 LGALS12Q96DT0 336 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 IFI27L2Q9H2X8 130 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 TMEM138Q9NPI0 162 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 SLC2A8Q9NY64 477 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 SIGLEC8Q9NYZ4 499 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms