RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 OR6C3Q9NZP0 311 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 RNF150Q9ULK6 438 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 AUP1Q9Y679 476 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 POMT1Q9Y6A1 747 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 ICE1Q9Y2F5 2266 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 MEX3AA1L020 520 aaKnown RBP15.79■□□□□ 0.12
USP39-202ENST00000409025 CLEC18AA5D8T8 446 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 LEUTXA8MZ59 168 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 TPT1P13693 172 aaKnown RBP15.79■□□□□ 0.12
USP39-202ENST00000409025 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
USP39-202ENST00000409025 APOBEC3AP31941 199 aaPredicted RBP15.79■□□□□ 0.12
USP39-202ENST00000409025 MSMO1Q15800 293 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 ZCCHC24Q8N2G6 241 aaKnown RBP15.79■□□□□ 0.12
USP39-202ENST00000409025 CLEC18CQ8NCF0 446 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 CA5BP1Q8WTZ4 195 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 NEUROG1Q92886 237 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 C14orf79Q96F83 325 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 DYNLRB1Q9NP97 96 aa15.79■□□□□ 0.12
USP39-202ENST00000409025 IGHV3-43A0A0B4J1X8 118 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 TAAR5O14804 337 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 NMBP08949 121 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 IGHV3-43DP0DP04 118 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 NKX2-1P43699 371 aaPredicted RBP15.78■□□□□ 0.12
USP39-202ENST00000409025 FAM53AQ6NSI3 398 aaPredicted RBP15.78■□□□□ 0.12
USP39-202ENST00000409025 GAFA1Q96PS6 74 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 FAM234AQ9H0X4 552 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 SLC25A32Q9H2D1 315 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 KCNJ16Q9NPI9 418 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 CYTL1Q9NRR1 136 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 GYPAP02724 150 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 GRNP28799 593 aaKnown RBP15.78■□□□□ 0.12
USP39-202ENST00000409025 ZNF788Q6ZQV5 615 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 COMMD7Q86VX2 200 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 TGIF2LYQ8IUE0 185 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 C1orf87Q8N0U7 546 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 ABHD14BQ96IU4 210 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 CCL13Q99616 98 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 MS4A5Q9H3V2 200 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 RAB9BQ9NP90 201 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 JPT1Q9UK76 154 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 RCL1Q9Y2P8 373 aaKnown RBP15.78■□□□□ 0.12
USP39-202ENST00000409025 RNF115Q9Y4L5 304 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 CACNA1DQ01668 2161 aa15.78■□□□□ 0.12
USP39-202ENST00000409025 SELLP14151 372 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 P2RY1P47900 373 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 EFNB3Q15768 340 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 PDZD9Q8IXQ8 264 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 RNASE11Q8TAA1 199 aaKnown RBP15.77■□□□□ 0.12
USP39-202ENST00000409025 EDARADDQ8WWZ3 215 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 DCAF16Q9NXF7 216 aa15.77■□□□□ 0.12
USP39-202ENST00000409025 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 B9A039 149 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 DSCAMO60469 2012 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 LTC4SQ16873 150 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 BAP18Q8IXM2 172 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 GNG12Q9UBI6 72 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 RAI1Q7Z5J4 1906 aaPredicted RBP15.76■□□□□ 0.11
USP39-202ENST00000409025 TRAV38-1A0A0B4J264 116 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 NKX6-3A6NJ46 265 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 DEFB108AA8MXU0 73 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 LGALS8O00214 317 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 RRASP10301 218 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 SLC25A6P12236 298 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 PVALBP20472 110 aaPredicted RBP15.76■□□□□ 0.11
USP39-202ENST00000409025 EIF5AP63241 154 aaKnown RBP15.76■□□□□ 0.11
USP39-202ENST00000409025 CATR1Q13166 79 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 GPR157Q5UAW9 335 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 ZNF808Q8N4W9 903 aaPredicted RBP15.76■□□□□ 0.11
USP39-202ENST00000409025 DMBX1Q8NFW5 382 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 FAM216AQ8WUB2 273 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 LSM10Q969L4 123 aaKnown RBP15.76■□□□□ 0.11
USP39-202ENST00000409025 CALYQ9NYX4 217 aa15.76■□□□□ 0.11
USP39-202ENST00000409025 A0A1B0GU03 582 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 A0A1B0GW55 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 F2RL2O00254 374 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 SIGLEC5O15389 551 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 GPR137BO60478 399 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L2P0CJ85 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L3P0CJ86 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L4P0CJ87 422 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L5P0CJ88 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L6P0CJ89 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L7P0CJ90 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 CDSNQ15517 529 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 ZNF585BQ52M93 769 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4L9Q6RFH8 374 aaPredicted RBP15.75■□□□□ 0.11
USP39-202ENST00000409025 GPR146Q96CH1 333 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 CISD1Q9NZ45 108 aaKnown RBP15.75■□□□□ 0.11
USP39-202ENST00000409025 DUX4Q9UBX2 424 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 PSG11Q9UQ72 335 aa15.75■□□□□ 0.11
USP39-202ENST00000409025 SPTA1P02549 2419 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 TRGV10A0A0A0MS01 117 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 TMEM178BH3BS89 294 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 YPEL1O60688 119 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 PLAUP00749 431 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 IGKV1-39P01597 117 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 IGKV1D-39P04432 117 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 EIF4EBP1Q13541 118 aaPredicted RBP15.74■□□□□ 0.11
USP39-202ENST00000409025 MORN2Q502X0 79 aa15.74■□□□□ 0.11
USP39-202ENST00000409025 FAM74A1Q5RGS3 127 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms