RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TSTD1Q8NFU3 115 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR52R1Q8NGF1 315 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR51F2Q8NH61 342 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM239Q8WW34 195 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 RPEQ96AT9 228 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF285Q96NJ3 590 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 WFIKKN1Q96NZ8 548 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 KCNS3Q9BQ31 491 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF649Q9BS31 505 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 MED18Q9BUE0 208 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 C6orf62Q9GZU0 229 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR52D1Q9H346 318 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM27Q9HBJ8 222 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 EXOSC4Q9NPD3 245 aaKnown RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 C14orf105Q9NVL8 296 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 TXNL4BQ9NX01 149 aaKnown RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 CTSFQ9UBX1 484 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 SSR3Q9UNL2 185 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 SIGLEC7Q9Y286 467 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 MED31Q9Y3C7 131 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 DOCK6Q96HP0 2047 aa3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 NUP210Q8TEM1 1887 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P18-201ENST00000406327 MYOFQ9NZM1 2061 aa3.21□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A0B4J2E0 115 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A1B0GWA3 101 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A1B0GX12 115 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRDV1A0A1B0GX56 115 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 NCBP2LA6PVI3 153 aaKnown RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 INS-IGF2F8WCM5 200 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 J3QRE1 110 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 BHLHE40O14503 412 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CDRT1O95170 752 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 NSA2O95478 260 aaKnown RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGKV1D-16P01601 117 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 IFI30P13284 250 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 MYL9P24844 172 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 PFN2P35080 140 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 RBM34P42696 430 aaKnown RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CAPZBP47756 277 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 GABRA4P48169 554 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF138P52744 262 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CTBP2P56545 445 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPS25P62851 125 aaKnown RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 BTG2P78543 158 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 STX4Q12846 297 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 BIKQ13323 160 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 KRR1Q13601 381 aaKnown RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 C5orf64Q2M2E5 130 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CYB5R2Q6BCY4 276 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 RPL13AP3Q6NVV1 102 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CD200R1LQ6Q8B3 271 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ARL9Q6T311 187 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 TMPRSS11AQ6ZMR5 421 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 RTL4Q6ZR62 310 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF550Q7Z398 422 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 GKN2Q86XP6 184 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 GID4Q8IVV7 300 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 DEFB119Q8N690 84 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ACBD7Q8N6N7 88 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR52L1Q8NGH7 329 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR8K3Q8NH51 312 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 OR52N1Q8NH53 320 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 PFN4Q8NHR9 129 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 LMX1AQ8TE12 382 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC35B4Q969S0 331 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 TMEM203Q969S6 136 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC25A46Q96AG3 418 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 MRGPRFQ96AM1 343 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CEP19Q96LK0 163 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 KCTD7Q96MP8 289 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 TEAD3Q99594 435 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 SDHCQ99643 169 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 ZNF426Q9BUY5 554 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CCDC32Q9BV29 185 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CHRNA10Q9GZZ6 450 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 IFI27L2Q9H2X8 130 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 TPK1Q9H3S4 243 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 PRTFDC1Q9NRG1 225 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CMC2Q9NRP2 79 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 BABAM2Q9NXR7 383 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 CHD7Q9P2D1 2997 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 BAIAP2Q9UQB8 552 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 SLC35A3Q9Y2D2 325 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 KIAA1549LQ6ZVL6 1849 aa3.21□□□□□ -1.9
HMGB3P18-201ENST00000406327 KIF26AQ9ULI4 1882 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGLV1-36A0A0B4J1U3 117 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 IGHV5-51A0A0C4DH38 117 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 A0A1W2PQL4 384 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 DAPL1A0PJW8 107 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 TLCD2A6NGC4 264 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 FAM183AA6NL82 134 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 RIIAD1A6NNX1 92 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 A8MU10 97 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 POLR1CO15160 346 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 RGS5O15539 181 aa3.2□□□□□ -1.9
HMGB3P18-201ENST00000406327 AQP9O43315 295 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms