RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ZNF134P52741 427 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 HES1Q14469 280 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 GNMTQ14749 295 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 KIR2DS1Q14954 304 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 ARSJQ5FYB0 599 aaPredicted RBP16.68■□□□□ 0.26
PDGFA-204ENST00000405692 FAM53AQ6NSI3 398 aaPredicted RBP16.68■□□□□ 0.26
PDGFA-204ENST00000405692 TGIF2LXQ8IUE1 241 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 LYG1Q8N1E2 194 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 OR13F1Q8NGS4 319 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 RTN4IP1Q8WWV3 396 aaPredicted RBP16.68■□□□□ 0.26
PDGFA-204ENST00000405692 ST6GALNAC6Q969X2 333 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 FUNDC2Q9BWH2 189 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 GHITMQ9H3K2 345 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDGFA-204ENST00000405692 KCNK7Q9Y2U2 307 aa16.68■□□□□ 0.26
PDGFA-204ENST00000405692 DNHD1Q96M86 4753 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 SLC31A2O15432 143 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 SNRNP70P08621 437 aaKnown RBP16.67■□□□□ 0.26
PDGFA-204ENST00000405692 LSM3P62310 102 aaKnown RBP16.67■□□□□ 0.26
PDGFA-204ENST00000405692 HABP2Q14520 560 aaPredicted RBP16.67■□□□□ 0.26
PDGFA-204ENST00000405692 Q8N2B8 174 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 EDARADDQ8WWZ3 215 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 CFHR4Q92496 578 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 RHBDL2Q9NX52 303 aa16.67■□□□□ 0.26
PDGFA-204ENST00000405692 ITGB1BP1O14713 200 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 LANCL1O43813 399 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 GSTP1P09211 210 aaKnown RBP16.66■□□□□ 0.26
PDGFA-204ENST00000405692 TMEM11P17152 192 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 REG1BP48304 166 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 SERPINB10P48595 397 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 PITPNAQ00169 270 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 SRSF7Q16629 238 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDGFA-204ENST00000405692 CDNFQ49AH0 187 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 Q6ZPA2 131 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 OR4A4PQ8NGN8 299 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 ZNF702PQ9H963 129 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 PIPOXQ9P0Z9 390 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 SLC23A1Q9UHI7 598 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 SPATA2Q9UM82 520 aa16.66■□□□□ 0.26
PDGFA-204ENST00000405692 A0A0A6YYH2 397 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 A6NJ64 397 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 PEX14O75381 377 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 FCGR3AP08637 254 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 SCTP09683 121 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 SMIM18P0DKX4 95 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 CD1BP29016 333 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 C5orf24Q7Z6I8 188 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 IZUMO1Q8IYV9 350 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 MOB4Q9Y3A3 225 aa16.65■□□□□ 0.26
PDGFA-204ENST00000405692 FABP7O15540 132 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 DIRAS3O95661 229 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 IGKV1D-33P01593 117 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 IGKV1-33P01594 117 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 DTYMKP23919 212 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 RPS19P39019 145 aaKnown RBP16.64■□□□□ 0.25
PDGFA-204ENST00000405692 CEACAM6P40199 344 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 EBI3Q14213 229 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 HACD4Q5VWC8 232 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 FAM71F2Q6NXP2 309 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 OR2T10Q8NGZ9 312 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 S1PR3Q99500 378 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 CITED1Q99966 193 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 DIABLOQ9NR28 239 aa16.64■□□□□ 0.25
PDGFA-204ENST00000405692 RAB29O14966 203 aa16.63■□□□□ 0.25
PDGFA-204ENST00000405692 BLCAPP62952 87 aa16.63■□□□□ 0.25
PDGFA-204ENST00000405692 PNLIPRP3Q17RR3 467 aa16.63■□□□□ 0.25
PDGFA-204ENST00000405692 OR5H6Q8NGV6 325 aa16.63■□□□□ 0.25
PDGFA-204ENST00000405692 SIGLEC9Q9Y336 463 aa16.63■□□□□ 0.25
PDGFA-204ENST00000405692 FGF16O43320 207 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 MOSP00540 346 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 TGFBR1P36897 503 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 VDAC2P45880 294 aaPredicted RBP16.62■□□□□ 0.25
PDGFA-204ENST00000405692 GNG2P59768 71 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 HNF4GQ14541 408 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 Q6ZS49 121 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 ANKRD13BQ86YJ7 626 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 SLC25A46Q96AG3 418 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 KCTD12Q96CX2 325 aaKnown RBP16.62■□□□□ 0.25
PDGFA-204ENST00000405692 DCSTAMPQ9H295 470 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 OR1A1Q9P1Q5 309 aa16.62■□□□□ 0.25
PDGFA-204ENST00000405692 TENM1Q9UKZ4 2725 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ST8SIA5O15466 376 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 VBP1P61758 197 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 NCS1P62166 190 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 HERPUD1Q15011 391 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ZNF260Q3ZCT1 412 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ABCA11PQ4W5N1 156 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ZNF833PQ6ZTB9 187 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 GPR141Q7Z602 305 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 ODF3L1Q8IXM7 274 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 KLHDC1Q8N7A1 406 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 OR8H1Q8NGG4 311 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 OR10J5Q8NHC4 309 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 SLC25A38Q96DW6 304 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 S100A16Q96FQ6 103 aaKnown RBP16.61■□□□□ 0.25
PDGFA-204ENST00000405692 EAF1Q96JC9 268 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-204ENST00000405692 CABLES2Q9BTV7 478 aa16.61■□□□□ 0.25
PDGFA-204ENST00000405692 IFI27L2Q9H2X8 130 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms