RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZFP57Q9NU63 452 aa10.88□□□□□ -0.67
CXCL12-205ENST00000395794 AK6Q9Y3D8 172 aaKnown RBP10.88□□□□□ -0.67
CXCL12-205ENST00000395794 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 RRP9O43818 475 aaKnown RBP10.87□□□□□ -0.67
CXCL12-205ENST00000395794 CD37P11049 281 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 MAP2K4P45985 399 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 GPR12P47775 334 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 UNC119Q13432 240 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 GNMTQ14749 295 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 STPG2Q8N412 459 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 S1PR3Q99500 378 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 NICN1Q9BSH3 213 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 NECAP2Q9NVZ3 263 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 LINC00527Q9UJ94 153 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 MGAT4AQ9UM21 535 aa10.87□□□□□ -0.67
CXCL12-205ENST00000395794 ZNF736B4DX44 427 aaPredicted RBP10.86□□□□□ -0.67
CXCL12-205ENST00000395794 DUS4LO95620 317 aaKnown RBP10.86□□□□□ -0.67
CXCL12-205ENST00000395794 SLC6A1P30531 599 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 SOX6P35712 828 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 QRFPP83859 136 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 FABP5Q01469 135 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 HMGN3Q15651 99 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 TEX38Q6PEX7 206 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 ZNF367Q7RTV3 350 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 Q8N9W7 124 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
CXCL12-205ENST00000395794 KCNK15Q9H427 330 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 RAB26Q9ULW5 256 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 V9GY05 133 aa10.86□□□□□ -0.67
CXCL12-205ENST00000395794 PDCD5O14737 125 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 HSPA12AO43301 675 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 NAPSAO96009 420 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 IGLL1P15814 213 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
CXCL12-205ENST00000395794 MRPS15P82914 257 aaKnown RBP10.85□□□□□ -0.67
CXCL12-205ENST00000395794 LSAMPQ13449 338 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 MMDQ15546 238 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 TBCEQ15813 527 aaPredicted RBP10.85□□□□□ -0.67
CXCL12-205ENST00000395794 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 OR56B1Q8NGI3 324 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 PHF21AQ96BD5 680 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 FAM3DQ96BQ1 224 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 ZNF251Q9BRH9 671 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 GPR61Q9BZJ8 451 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 LPAR5Q9H1C0 372 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 Q9H521 79 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 PIPOXQ9P0Z9 390 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 HSF4Q9ULV5 492 aa10.85□□□□□ -0.67
CXCL12-205ENST00000395794 LINC01548A6NM66 108 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 RAB29O14966 203 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 SOCS1O15524 211 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 PRB2P02812 416 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-205ENST00000395794 VDAC1P21796 283 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 ZBTB25P24278 435 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 MYL9P24844 172 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 VEGFCP49767 419 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 F2RL1P55085 397 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 CXorf66Q5JRM2 361 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-205ENST00000395794 C5orf24Q7Z6I8 188 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 FAM89BQ8N5H3 189 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 KLHL30-AS1Q8NEE0 82 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 DPF1Q92782 380 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 MRPL20Q9BYC9 149 aaKnown RBP10.84□□□□□ -0.67
CXCL12-205ENST00000395794 GHITMQ9H3K2 345 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 C12orf4Q9NQ89 552 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 ZNF107Q9UII5 783 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-205ENST00000395794 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
CXCL12-205ENST00000395794 SAA2-SAA4A0A096LPE2 208 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 A0A0A6YYD4 124 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 TRBV6-6A0A0A6YYG2 114 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 DENRO43583 198 aaKnown RBP10.83□□□□□ -0.68
CXCL12-205ENST00000395794 SAA2P0DJI9 122 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-205ENST00000395794 OR5H8P0DN80 308 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 OR3A3P47888 321 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 CLDN12P56749 244 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 ACTBP60709 375 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 C2orf76Q3KRA6 126 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 FOXB2Q5VYV0 432 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 ZNF880Q6PDB4 577 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 FAM71E2Q8N5Q1 922 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 EDARADDQ8WWZ3 215 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 GFI1Q99684 422 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 NABP2Q9BQ15 211 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
CXCL12-205ENST00000395794 KIAA1456Q9P272 454 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 RAB22AQ9UL26 194 aa10.83□□□□□ -0.68
CXCL12-205ENST00000395794 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
CXCL12-205ENST00000395794 ST8SIA5O15466 376 aa10.82□□□□□ -0.68
CXCL12-205ENST00000395794 MRPS14O60783 128 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms