RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PSG2P11465 335 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 UBA52P62987 128 aaKnown RBP12.58□□□□□ -0.4
SCAF11-204ENST00000395454 HOXA4Q00056 320 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-204ENST00000395454 COL10A1Q03692 680 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 CR1LQ2VPA4 569 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 SPRNQ5BIV9 151 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 ITLN1Q8WWA0 313 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 EGLN1Q9GZT9 426 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 CCL28Q9NRJ3 127 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 OVOL3O00110 214 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 PRDX2P32119 198 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 MSMO1Q15800 293 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 DCUN1D4Q92564 292 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 LURAP1Q96LR2 239 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 KIF25Q9UIL4 384 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
SCAF11-204ENST00000395454 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 KANTRA0A1W2PQU2 76 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 PGLYRP1O75594 196 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-204ENST00000395454 LY6HO94772 140 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 TNFRSF1AP19438 455 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 C6orf183Q5T699 404 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 OR8H3Q8N146 312 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 OR5D13Q8NGL4 314 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 GCM1Q9NP62 436 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 KCNIP1Q9NZI2 227 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 DSCAML1Q8TD84 2053 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 NDUFS7O75251 213 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 DEDDO75618 318 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 F2RP25116 425 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 LUMP51884 338 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-204ENST00000395454 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
SCAF11-204ENST00000395454 AESQ08117 197 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 MOGAT3Q86VF5 341 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 OR1S1Q8NH92 325 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 SNX22Q96L94 193 aa12.56□□□□□ -0.4
SCAF11-204ENST00000395454 S100GP29377 79 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
SCAF11-204ENST00000395454 ANGPTL6Q8NI99 470 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 NEU4Q8WWR8 484 aaPredicted RBP12.55□□□□□ -0.4
SCAF11-204ENST00000395454 GALMQ96C23 342 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 ARPC5LQ9BPX5 153 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 DYSFO75923 2080 aa12.55□□□□□ -0.4
SCAF11-204ENST00000395454 NMSQ5H8A3 153 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 PERPQ96FX8 193 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 RNF7Q9UBF6 113 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 NOTCH2Q04721 2471 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 K7N7A8 449 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 HSD17B6O14756 317 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 MGST3O14880 152 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 HBZP02008 142 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 NMBP08949 121 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 ATP5J2P56134 94 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 RAB14P61106 215 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 HTD2P86397 168 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 PPP1R35Q8TAP8 253 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 CCL17Q92583 94 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 RBPMSQ93062 196 aaKnown RBP12.54□□□□□ -0.4
SCAF11-204ENST00000395454 SDSLQ96GA7 329 aa12.54□□□□□ -0.4
SCAF11-204ENST00000395454 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-204ENST00000395454 IGHV1-69-2A0A0G2JMI3 117 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 C15orf65H3BRN8 121 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-204ENST00000395454 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-204ENST00000395454 RLN2P04090 185 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 DAOP14920 347 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 VDAC1P21796 283 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 GABRA2P47869 451 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 GLIPR1P48060 266 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 EFNA4P52798 201 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 TEX36Q5VZQ5 186 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 STUMQ69YW2 141 aa12.53□□□□□ -0.4
SCAF11-204ENST00000395454 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms