RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 OR14J1Q9UGF5 321 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 CACFD1Q9UGQ2 172 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 OOEPA6NGQ2 149 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 TSPAN15O95858 294 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 CEACAM6P40199 344 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 SMIM21Q3B7S5 101 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 RP1L1Q8IWN7 2480 aaPredicted RBP18.11■□□□□ 0.49
TRIM54-202ENST00000380075 PRR18Q8N4B5 295 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 GPR146Q96CH1 333 aa18.11■□□□□ 0.49
TRIM54-202ENST00000380075 PSPNO60542 156 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 CAMLGP49069 296 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 MSMO1Q15800 293 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 Q6ZR03 302 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 GALMQ96C23 342 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 RAB40CQ96S21 281 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 ZNF835Q9Y2P0 537 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 RNF115Q9Y4L5 304 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 TRAV39A0A0B4J263 110 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 UQCRFS1P47985 274 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 FABP6P51161 128 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 ARHGDIBP52566 201 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 RNASE11Q8TAA1 199 aaKnown RBP18.1■□□□□ 0.49
TRIM54-202ENST00000380075 MAGT1Q9H0U3 335 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 TMEM231Q9H6L2 316 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 KCNS2Q9ULS6 477 aa18.1■□□□□ 0.49
TRIM54-202ENST00000380075 UMAD1C9J7I0 102 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 CHST1O43916 411 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 ATF4P18848 351 aaPredicted RBP18.09■□□□□ 0.49
TRIM54-202ENST00000380075 GNLYP22749 145 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 RBPJQ06330 500 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 GUCA2BQ16661 112 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 TIMM23BQ5SRD1 257 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 HSD17B11Q8NBQ5 300 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 FAM57AQ8TBR7 257 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 C19orf12Q9NSK7 152 aa18.09■□□□□ 0.49
TRIM54-202ENST00000380075 OR8U9P0C7N5 309 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 RPL23AP62750 156 aaKnown RBP18.08■□□□□ 0.49
TRIM54-202ENST00000380075 PAX5Q02548 391 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 C1orf185Q5T7R7 199 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 ZNF826PQ6ZT77 177 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 OR8U1Q8NH10 309 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 PPP1R3CQ9UQK1 317 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 FAM96BQ9Y3D0 163 aa18.08■□□□□ 0.49
TRIM54-202ENST00000380075 IGHV3-64DA0A0J9YX35 117 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 PRH1P02810 166 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 TIMP3P35625 211 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 SNCAP37840 140 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 PRAMEF6Q5VXH4 476 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 DRAM1Q8N682 238 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 ZNF645Q8N7E2 425 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 LFNGQ8NES3 379 aa18.08■□□□□ 0.48
TRIM54-202ENST00000380075 GNPNAT1Q96EK6 184 aaPredicted RBP18.08■□□□□ 0.48
TRIM54-202ENST00000380075 SEBOXQ9HB31 216 aaPredicted RBP18.08■□□□□ 0.48
TRIM54-202ENST00000380075 A0A0G2JRQ6 117 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 WNT9BO14905 357 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 IL2RGP31785 369 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 ZNF616Q08AN1 781 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 CLINT1Q14677 625 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 MIDNQ504T8 468 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 TRAT1Q6PIZ9 186 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 STX12Q86Y82 276 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 DOLPP1Q86YN1 238 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 OR10Z1Q8NGY1 313 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 SH3BGRL3Q9H299 93 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 SH3BGRL2Q9UJC5 107 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 WSB1Q9Y6I7 421 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 ZGRF1Q86YA3 2104 aa18.07■□□□□ 0.48
TRIM54-202ENST00000380075 FAM74A7A6NL05 159 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 C12orf77C9JDV5 145 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 K7N7A8 449 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 PRRG2O14669 202 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 DFFBO76075 338 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 TMEM50AO95807 157 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 SFTA3P0C7M3 94 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 OR3A1P47881 315 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 CEBPDP49716 269 aaPredicted RBP18.06■□□□□ 0.48
TRIM54-202ENST00000380075 PEA15Q15121 130 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 FAM74A3Q4VXF1 159 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 FAM90A1Q86YD7 464 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 CLRN3Q8NCR9 226 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 OR5C1Q8NGR4 320 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 LURAP1Q96LR2 239 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 MSL2Q9HCI7 577 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 KIAA1324LA8MWY0 1029 aaPredicted RBP18.06■□□□□ 0.48
TRIM54-202ENST00000380075 NUPL2O15504 423 aaKnown RBP18.06■□□□□ 0.48
TRIM54-202ENST00000380075 PTBP3O95758 552 aaKnown RBP18.06■□□□□ 0.48
TRIM54-202ENST00000380075 IGKV1-39P01597 117 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 IGKV1D-39P04432 117 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 EPHA1P21709 976 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 CD80P33681 288 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 PAX9P55771 341 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 TMEM171Q8WVE6 324 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 FZR1Q9UM11 496 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 FAM215AQ9Y5M1 114 aa18.06■□□□□ 0.48
TRIM54-202ENST00000380075 ATP6V0CP27449 155 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 DYNLT3P51808 116 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 ZNF585BQ52M93 769 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 ODF3L1Q8IXM7 274 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 NINJ1Q92982 152 aa18.05■□□□□ 0.48
TRIM54-202ENST00000380075 COQ2Q96H96 371 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms