RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 HTD2P86397 168 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 C19orf54Q5BKX5 351 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 C6orf141Q5SZD1 244 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 TMEM65Q6PI78 240 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 MINDY2Q8NBR6 621 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 NPBQ8NG41 125 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 GGHQ92820 318 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 JPT1Q9UK76 154 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 VSIG4Q9Y279 399 aa13.53□□□□□ -0.24
HLA-A-201ENST00000376802 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 PNMA8CA0A1B0GUJ8 204 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 NBR2O15453 112 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 YPEL1O60688 119 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 PDCD6O75340 191 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 BLVRBP30043 206 aaPredicted RBP13.52□□□□□ -0.25
HLA-A-201ENST00000376802 CAPGP40121 348 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 ST3GAL4Q11206 333 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 LY6G6FQ5SQ64 297 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 ZNF833PQ6ZTB9 187 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 DCUN1D4Q92564 292 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 YPEL2Q96QA6 119 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 PARP11Q9NR21 331 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 KCNIP1Q9NZI2 227 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 FBXO7Q9Y3I1 522 aa13.52□□□□□ -0.25
HLA-A-201ENST00000376802 DNAH7Q8WXX0 4024 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 HUWE1Q7Z6Z7 4374 aaKnown RBP13.51□□□□□ -0.25
HLA-A-201ENST00000376802 C3orf84H3BNL1 204 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 NDUFA3O95167 84 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 LRRC36Q1X8D7 754 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 LIN54Q6MZP7 749 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 FAM46BQ96A09 425 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 ZNF251Q9BRH9 671 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 ALX4Q9H161 411 aaPredicted RBP13.51□□□□□ -0.25
HLA-A-201ENST00000376802 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 CHCHD3Q9NX63 227 aaKnown RBP13.51□□□□□ -0.25
HLA-A-201ENST00000376802 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
HLA-A-201ENST00000376802 SAA2-SAA4A0A096LPE2 208 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 SOX15O60248 233 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 BAG2O95816 211 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 SAA2P0DJI9 122 aaPredicted RBP13.5□□□□□ -0.25
HLA-A-201ENST00000376802 NDPQ00604 133 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 LAIR2Q6ISS4 152 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 ZNF429Q86V71 674 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 CYGBQ8WWM9 190 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
HLA-A-201ENST00000376802 GALMQ96C23 342 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 SULT4A1Q9BR01 284 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 UQCC2Q9BRT2 126 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 IFI27L2Q9H2X8 130 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 TENM2Q9NT68 2774 aa13.5□□□□□ -0.25
HLA-A-201ENST00000376802 LY86O95711 162 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 CD1AP06126 327 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
HLA-A-201ENST00000376802 CELP19835 753 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
HLA-A-201ENST00000376802 TAS2R43P59537 309 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 MED21Q13503 144 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 HMGN3Q15651 99 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 NKAIN3Q8N8D7 197 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 FAAP24Q9BTP7 215 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 ISYNA1Q9NPH2 558 aa13.49□□□□□ -0.25
HLA-A-201ENST00000376802 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 FCN1O00602 326 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 OVOL1O14753 267 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 INSL4Q14641 139 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 OR10K2Q6IF99 312 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 CASTOR1Q8WTX7 329 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 TOLLIPQ9H0E2 274 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 GHRLQ9UBU3 117 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 LRRC42Q9Y546 428 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 NUBP2Q9Y5Y2 271 aa13.48□□□□□ -0.25
HLA-A-201ENST00000376802 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 RGS11O94810 467 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 CT45A6P0DMU7 189 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 CT45A5P0DMU8 189 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 CT45A7P0DMV0 189 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 SPNP16150 400 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 SLURP1P55000 103 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 CX3CL1P78423 397 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 FAM131AQ6UXB0 335 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 CST11Q9H112 138 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 FBXL15Q9H469 300 aa13.47□□□□□ -0.25
HLA-A-201ENST00000376802 GNAO1P09471 354 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 SNRPBP14678 240 aaKnown RBP13.46□□□□□ -0.25
HLA-A-201ENST00000376802 HTR2CP28335 458 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 WNT4P56705 351 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 RPS27AP62979 156 aaKnown RBP13.46□□□□□ -0.25
HLA-A-201ENST00000376802 ECSCRQ19T08 205 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 CASC10Q5T4H9 136 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 ZNF660Q6AZW8 331 aaPredicted RBP13.46□□□□□ -0.25
HLA-A-201ENST00000376802 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
HLA-A-201ENST00000376802 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms