RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ADGRG7Q96K78 797 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 HSPB9Q9BQS6 159 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 MARVELD1Q9BSK0 173 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TRAF4Q9BUZ4 470 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 FNDC4Q9H6D8 234 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 VSIRQ9H7M9 311 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IDI2-AS1Q9NZ38 188 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 C19orf25Q9UFG5 118 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR12D3Q9UGF7 316 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ING4Q9UNL4 249 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 POLR1DQ9Y2S0 133 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 A0A1B0GV50 99 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TRIM49D1C9J1S8 452 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 H0YIZ8 118 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 NME4O00746 187 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 COPEO14579 308 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 GCM2O75603 506 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TBX6O95947 436 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 HPRT1P00492 218 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IFNA17P01571 189 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 DBIP07108 87 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 C8GP07360 202 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR5G3P0C626 314 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 MPC1LP0DKB6 136 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CD79AP11912 226 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 MYOD1P15172 320 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 MUC1P15941 1255 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 PSMB9P28065 219 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 S100A7P31151 101 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 FMO3P31513 532 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 GPR183P32249 361 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SAA4P35542 130 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 GGT2P36268 569 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TSFMP43897 325 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SEC61A1P61619 476 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 RPL8P62917 257 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IFITM2Q01629 132 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 FOXF2Q12947 444 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CLINT1Q14677 625 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CST6Q15828 149 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ACOT6Q3I5F7 207 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 VAX1Q5SQQ9 334 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ZFAND6Q6FIF0 208 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 AGTRAPQ6RW13 159 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 UNQ9370/PRO34162Q6UXP9 181 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 GFRALQ6UXV0 394 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CHMP1BQ7LBR1 199 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ZNF575Q86XF7 245 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TMEM86BQ8N661 226 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 COX18Q8N8Q8 333 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 BEST4Q8NFU0 473 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR10G4Q8NGN3 311 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR2K2Q8NGT1 345 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 NPRL2Q8WTW4 380 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CANT1Q8WVQ1 401 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 EEF1AKMT3Q96AZ1 226 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TMEM159Q96B96 161 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 DIRAS2Q96HU8 199 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 NEDD4LQ96PU5 975 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR52E6Q96RD3 313 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 LRRC61Q9BV99 259 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TM2D2Q9BX73 214 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SLC17A9Q9BYT1 436 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 RNF167Q9H6Y7 350 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 Q9HAA7 133 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 B3GAT2Q9NPZ5 323 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 RBM22Q9NW64 420 aaKnown RBP eCLIP2.87□□□□□ -1.957e-6■■■■□ 24.6
ECHDC1-205ENST00000368295 RAB22AQ9UL26 194 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 L3MBTL1Q9Y468 752 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 WSB1Q9Y6I7 421 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 A0A1W2PRE2 83 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 OR5H1A6NKK0 313 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 H3BSA7 217 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 DEGS1O15121 323 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 HMGB3O15347 200 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 NDUFS7O75251 213 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 GPD1P21695 349 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 USF1P22415 310 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 DDTP30046 118 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 GZMMP51124 257 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 TDGF1P3P51864 188 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 ABCE1P61221 599 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 ECH1Q13011 328 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 OR8G1Q15617 311 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 DUSP5Q16690 384 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 MICAQ29983 383 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 C1orf194Q5T5A4 169 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 FAM162BQ5T6X4 162 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 SFXN4Q6P4A7 337 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 ZNF613Q6PF04 617 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 ADAMTSL5Q6ZMM2 481 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 PDZD9Q8IXQ8 264 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 SLC30A7Q8NEW0 376 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 OR51S1Q8NGJ8 323 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 TMEM255BQ8WV15 326 aa2.86□□□□□ -1.95
ECHDC1-205ENST00000368295 PPCDCQ96CD2 204 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms