RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 RNF126Q9BV68 326 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 PARP11Q9NR21 331 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 DECR2Q9NUI1 292 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 METTL1Q9UBP6 276 aaKnown RBP12.29□□□□□ -0.44
CXCL12-201ENST00000343575 OR14J1Q9UGF5 321 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 TANC2Q9HCD6 1990 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 USF3Q68DE3 2245 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 A1L4Q6 167 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 SIRPB1O00241 398 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 GATCO43716 136 aaKnown RBP12.28□□□□□ -0.44
CXCL12-201ENST00000343575 CD5P06127 495 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 ZNF44P15621 663 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 CD80P33681 288 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 ARL6IP1Q15041 203 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 SMIM21Q3B7S5 101 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 KCTD9Q7L273 389 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 MAFIPQ8WZ33 124 aa12.28□□□□□ -0.44
CXCL12-201ENST00000343575 SEBOXQ9HB31 216 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-201ENST00000343575 SH2D1BO14796 132 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 FBXO24O75426 580 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 NAPSAO96009 420 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 DVL1P1P54792 670 aaPredicted RBP12.27□□□□□ -0.44
CXCL12-201ENST00000343575 HABP2Q14520 560 aaPredicted RBP12.27□□□□□ -0.44
CXCL12-201ENST00000343575 VAX1Q5SQQ9 334 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 LAMP3Q9UQV4 416 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 WIPI2Q9Y4P8 454 aa12.27□□□□□ -0.44
CXCL12-201ENST00000343575 C13orf42A0A1B0GVH6 325 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 TMEM178BH3BS89 294 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 J3QKU1 62 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 FCGR3AP08637 254 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 SFTA3P0C7M3 94 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 AKR1C4P17516 323 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 F2RL1P55085 397 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 CCL17Q92583 94 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 MRGPRFQ96AM1 343 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 ST6GALNAC5Q9BVH7 336 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 UBTD1Q9HAC8 227 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
CXCL12-201ENST00000343575 USP9YO00507 2555 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 LYNX1G3V0Z9 82 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 ZNF737O75373 536 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 GOSR1O95249 250 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 SFT2D2O95562 160 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 CSN2P05814 226 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 GLAP06280 429 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 LYNX1P0DP58 116 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 MUC1P15941 1255 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 RCC1P18754 421 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 COL8A2P25067 703 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 PRDX2P32119 198 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 SULT1A2P50226 295 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 SNRPEP62304 92 aaKnown RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 TEX36Q5VZQ5 186 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 SP5Q6BEB4 398 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-201ENST00000343575 C5orf24Q7Z6I8 188 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 NANPQ8TBE9 248 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 GSN-AS1Q9NRJ2 163 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 TMEM106BQ9NUM4 274 aa12.26□□□□□ -0.45
CXCL12-201ENST00000343575 IGHV1-69-2A0A0G2JMI3 117 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 LY6HO94772 140 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 GAPDHP04406 335 aaKnown RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 DTYMKP23919 212 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 HRH1P35367 487 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 COL10A1Q03692 680 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 STUMQ69YW2 141 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 GAPTQ8N292 157 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 OR11L1Q8NGX0 322 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 C2CD4CQ8TF44 421 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 C2orf50Q96LR7 162 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 TENM4Q6N022 2769 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 LINC00587B1AMM8 73 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 WRBO00258 174 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 TNFRSF13BO14836 293 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 OR3A1P47881 315 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 ADAD2Q8NCV1 583 aaKnown RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 DEFB108BQ8NET1 73 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 TCTEX1D2Q8WW35 142 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 SLC5A7Q9GZV3 580 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
CXCL12-201ENST00000343575 ZNF701Q9NV72 531 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-201ENST00000343575 SELLP14151 372 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 FPR2P25090 351 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 TLE4Q04727 773 aa12.24□□□□□ -0.45
CXCL12-201ENST00000343575 FAM209BQ5JX69 171 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms