RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ZNF808Q8N4W9 903 aaPredicted RBP16.83■□□□□ 0.28
CRLF3-201ENST00000324238 OR10V1Q8NGI7 309 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 RPUSD4Q96CM3 377 aaKnown RBP16.83■□□□□ 0.28
CRLF3-201ENST00000324238 TRAPPC2LQ9UL33 140 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 BTBD17A6NE02 478 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 GALR2O43603 387 aaPredicted RBP16.83■□□□□ 0.28
CRLF3-201ENST00000324238 MAS1LP35410 378 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 LHX2P50458 406 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 S100PBPQ96BU1 408 aa16.83■□□□□ 0.28
CRLF3-201ENST00000324238 PPP1R2P9O14990 202 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 GAMTQ14353 236 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 SSPNQ14714 243 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 RTP5Q14D33 572 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 ADIRFQ15847 76 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 OR5P3Q8WZ94 311 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 CLEC18AA5D8T8 446 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 KRASP01116 189 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 IGKV1D-33P01593 117 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 IGKV1-33P01594 117 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 CELA3BP08861 270 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 BCL2P10415 239 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 H1FOOQ8IZA3 346 aaPredicted RBP16.82■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF525Q8N782 197 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 CLEC18CQ8NCF0 446 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 Q8NFD4 153 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 RBMXL1Q96E39 390 aaKnown RBP16.82■□□□□ 0.28
CRLF3-201ENST00000324238 PLPPR2Q96GM1 343 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 POM121L2Q96KW2 1035 aa16.82■□□□□ 0.28
CRLF3-201ENST00000324238 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
CRLF3-201ENST00000324238 ANKRD30BLA7E2S9 258 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 MT-CO3P00414 261 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 CLDN18P56856 261 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF585BQ52M93 769 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 TMPRSS7Q7RTY8 843 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 BOKQ9UMX3 212 aaPredicted RBP16.81■□□□□ 0.28
CRLF3-201ENST00000324238 RAMP3O60896 148 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 CEACAM6P40199 344 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 CLN3Q13286 438 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 APH1AQ96BI3 265 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 TECTBQ96PL2 329 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 SLC25A22Q9H936 323 aa16.81■□□□□ 0.28
CRLF3-201ENST00000324238 TDGF1P13385 188 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF816Q0VGE8 651 aaPredicted RBP16.8■□□□□ 0.28
CRLF3-201ENST00000324238 CA5BP1Q8WTZ4 195 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 CABLES2Q9BTV7 478 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 PRO3102Q9H379 93 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 SMDT1Q9H4I9 107 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 UFSP2Q9NUQ7 469 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 CDIPTO14735 213 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 DFFBO76075 338 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 CLDN1O95832 211 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 HBE1P02100 147 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 ALKBH2Q6NS38 261 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 SLC35E3Q7Z769 313 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 HIST3H2BBQ8N257 126 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 OR5A2Q8NGI9 324 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 TTTY12Q9BZ98 90 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 SYNGR4O95473 234 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 GRPP07492 148 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 PMP22Q01453 160 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 DHRS13Q6UX07 377 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 MCEMP1Q8IX19 187 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 TMEM251Q8N6I4 163 aa16.8■□□□□ 0.28
CRLF3-201ENST00000324238 MAP1LC3B2A6NCE7 125 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 CEACAM1P13688 526 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 S100GP29377 79 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 PLP2Q04941 152 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 Q6ZS49 121 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 WDR86Q86TI4 376 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 TPRX1Q8N7U7 411 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 MAP1LC3BQ9GZQ8 125 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 ZNF703Q9H7S9 590 aaPredicted RBP16.79■□□□□ 0.28
CRLF3-201ENST00000324238 CLN8Q9UBY8 286 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 GAB2Q9UQC2 676 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 A0A087WWC5 75 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 A0A1B0GU03 582 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 COL8A2P25067 703 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 G6PCP35575 357 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 MDH2P40926 338 aaKnown RBP16.79■□□□□ 0.28
CRLF3-201ENST00000324238 BTNL3Q6UXE8 466 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 DEFB123Q8N688 67 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 LHX4Q969G2 390 aa16.79■□□□□ 0.28
CRLF3-201ENST00000324238 CADP27708 2225 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 OR2H2O95918 312 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 CTXN2P0C2S0 81 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 PRSS8Q16651 343 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 GCNT2Q8N0V5 402 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 RPP25LQ8N5L8 163 aaKnown RBP16.78■□□□□ 0.28
CRLF3-201ENST00000324238 RAB40CQ96S21 281 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 ELOVL1Q9BW60 279 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A10PA6NDY2 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A18PA6NE21 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A16PA6NEW6 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A20PA6NIJ5 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A8PA6NJQ4 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A7PA6NKC0 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A22PA8MWA6 464 aa16.78■□□□□ 0.28
CRLF3-201ENST00000324238 FAM90A12PA8MX19 464 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms