RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CLN3Q13286 438 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 RNASEH2CQ8TDP1 164 aaKnown RBP16.18■□□□□ 0.18
RTN4-201ENST00000317610 TMEM9BQ9NQ34 198 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 FREM1Q5H8C1 2179 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 APLNRP35414 380 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 NCR3LG1Q68D85 454 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 TMEM14EPQ6UXP3 125 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 TGIF2LYQ8IUE0 185 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 C17orf78Q8N4C9 275 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 IL1F10Q8WWZ1 152 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 ANKRD30BLA7E2S9 258 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 DVL1O14640 695 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 KBTBD11O94819 623 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 ARR3P36575 388 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 CYB561P49447 251 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 SSTP61278 116 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 COA6Q5JTJ3 125 aaKnown RBP16.17■□□□□ 0.18
RTN4-201ENST00000317610 DBX2Q6ZNG2 339 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 SMIM7Q9BQ49 75 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 PPP1R3CQ9UQK1 317 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 CFAP54Q96N23 3096 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 ARGFXA6NJG6 315 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 TSTD3H0UI37 97 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 LILRA1O75019 489 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 OTX2P32243 289 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 LHX2P50458 406 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 MEF2BQ02080 365 aaPredicted RBP16.17■□□□□ 0.18
RTN4-201ENST00000317610 SLC38A11Q08AI6 406 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 TMEM241Q24JQ0 296 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 PMS2CLQ68D20 193 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 C16orf82Q7Z2V1 217 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 TUSC5Q8IXB3 177 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 RPP25LQ8N5L8 163 aaKnown RBP16.17■□□□□ 0.18
RTN4-201ENST00000317610 LHX4Q969G2 390 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 OR51I2Q9H344 312 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 PRSS50Q9UI38 385 aa16.17■□□□□ 0.18
RTN4-201ENST00000317610 IGKV1D-33P01593 117 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 IGKV1-33P01594 117 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 ELLP55199 621 aaPredicted RBP16.16■□□□□ 0.18
RTN4-201ENST00000317610 JOSD1Q15040 202 aaPredicted RBP16.16■□□□□ 0.18
RTN4-201ENST00000317610 SPANXN5Q5MJ07 72 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 BEND4Q6ZU67 534 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 GPR87Q9BY21 358 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 SLC39A9Q9NUM3 307 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 BOKQ9UMX3 212 aaPredicted RBP16.16■□□□□ 0.18
RTN4-201ENST00000317610 TMEM250H0YL14 139 aa16.16■□□□□ 0.18
RTN4-201ENST00000317610 PCSK5Q92824 1860 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 UBE2L5PA0A1B0GUS4 154 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 MKRN2OSH3BPM6 223 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 CD55P08174 381 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 CLDN18P56856 261 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 ADIRFQ15847 76 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 ZNF497Q6ZNH5 498 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 KMT2EQ8IZD2 1858 aa16.15■□□□□ 0.18
RTN4-201ENST00000317610 C3orf80F5H4A9 247 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 J3QT63 122 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 RHBDL1O75783 438 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 SERPINA7P05543 415 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 MDKP21741 143 aaPredicted RBP16.14■□□□□ 0.18
RTN4-201ENST00000317610 RPL23P62829 140 aaKnown RBP16.14■□□□□ 0.18
RTN4-201ENST00000317610 COL10A1Q03692 680 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 BSXQ3C1V8 233 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 TDHQ8IZJ6 230 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 OR51G1Q8NGK1 321 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 OR1K1Q8NGR3 316 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 OR1P1Q8NH06 330 aa16.14■□□□□ 0.18
RTN4-201ENST00000317610 WDFY3Q8IZQ1 3526 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 A0A087X0M5 115 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 A0A1B0GX30 115 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 AMBPP02760 352 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 WNT5AP41221 380 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 KIAA2026Q5HYC2 2103 aa16.14■□□□□ 0.17
RTN4-201ENST00000317610 ACSM6Q6P461 480 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 UNQ6494/PRO21346Q6UXR6 183 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.13■□□□□ 0.17
RTN4-201ENST00000317610 PRO1933Q9H354 126 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 ZNF703Q9H7S9 590 aaPredicted RBP16.13■□□□□ 0.17
RTN4-201ENST00000317610 KCNS2Q9ULS6 477 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 ESPL1Q14674 2120 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 TRAV39A0A0B4J263 110 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 A0A1W2PR80 420 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 PLP2Q04941 152 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 SRYQ05066 204 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 SSX9Q7RTT3 188 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 FGFRL1Q8N441 504 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 DRAM1Q8N682 238 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 ACTR3CQ9C0K3 210 aaPredicted RBP16.13■□□□□ 0.17
RTN4-201ENST00000317610 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 MBNL3Q9NUK0 354 aaKnown RBP16.13■□□□□ 0.17
RTN4-201ENST00000317610 HSPB7Q9UBY9 170 aa16.13■□□□□ 0.17
RTN4-201ENST00000317610 CTXND1A0A1B0GTU2 59 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 GZMBP10144 247 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 ZNF16P17020 682 aaPredicted RBP16.12■□□□□ 0.17
RTN4-201ENST00000317610 GZMHP20718 246 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 PSMB3P49720 205 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 PDLIM4P50479 330 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 DUSP3P51452 185 aaPredicted RBP16.12■□□□□ 0.17
RTN4-201ENST00000317610 TNFRSF9Q07011 255 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 ATP6V1FQ16864 119 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 GAB2Q9UQC2 676 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms