RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 FAM90A24PP0C7X0 464 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TLE1Q04724 770 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 VHLLQ6RSH7 139 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 ANKRD37Q7Z713 158 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TRAPPC1Q9Y5R8 145 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 hCG_38984A0A1B0GV85 526 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 MLNRO43193 412 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 GCH1P30793 250 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 ARL4DP49703 201 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TNFSF10P50591 281 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 RAB7AP51149 207 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TESK1Q15569 626 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 COL5A1-AS1Q5SY13 56 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TPTE2P1Q5T6R2 138 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 OR4F5Q8NH21 305 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 WDYHV1Q96HA8 205 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 OR4F4Q96R69 305 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
RPUSD4-201ENST00000298317 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 WNT2P09544 360 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 PSG2P11465 335 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 KIR2DS4P43632 304 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 KIR2DS1Q14954 304 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 KRTAP27-1Q3LI81 207 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 PLCXD3Q63HM9 321 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 LMX1AQ8TE12 382 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 LSM10Q969L4 123 aaKnown RBP11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 ZNF837Q96EG3 531 aaPredicted RBP11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 BTF3L4Q96K17 158 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 ZNF391Q9UJN7 358 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 CTXND1A0A1B0GTU2 59 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 UMODP07911 640 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 CTXN2P0C2S0 81 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 CD99P14209 185 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 TFPI2P48307 235 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 PPP1CBP62140 327 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 RNF151Q2KHN1 245 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 ACSM6Q6P461 480 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 BATF2Q8N1L9 274 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 OR1F12Q8NHA8 337 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 ULBP2Q9BZM5 246 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 SLC25A22Q9H936 323 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 PLA2G3Q9NZ20 509 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 ATP23Q9Y6H3 246 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 SPAG17Q6Q759 2223 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 REV3LO60673 3130 aa11.5□□□□□ -0.57
RPUSD4-201ENST00000298317 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 IGKV1-39P01597 117 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 IGKV1D-39P04432 117 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 SERPINE2P07093 398 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 CHRNB4P30926 498 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 OR8G2PQ6IF36 304 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 Q6ZWC4 215 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 CMTM2Q8TAZ6 248 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 NEIL1Q96FI4 390 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 TECTBQ96PL2 329 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 RPH3ALQ9UNE2 315 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 A0A1W2PPC4 97 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 ZNF320A2RRD8 509 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 PDGFBP01127 241 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 EPHA8P29322 1005 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 S100GP29377 79 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 PLA2G5P39877 138 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 RANP62826 216 aaKnown RBP11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 BATFQ16520 125 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 ATP6V1FQ16864 119 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 TDRG1Q3Y452 100 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 CST9LP1Q5W188 147 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 STRADBQ9C0K7 418 aa11.49□□□□□ -0.57
RPUSD4-201ENST00000298317 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 NPIPA2E9PIF3 369 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 NPIPA3F8WFD2 350 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 HMGB3O15347 200 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 CLDN15P56746 228 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 LINC01551Q86U37 167 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 PIGCQ92535 297 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 AURKAIP1Q9NWT8 199 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 MED12Q93074 2177 aa11.48□□□□□ -0.57
RPUSD4-201ENST00000298317 IGHV3-15A0A0B4J1V0 119 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms