RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 MPV17P39210 176 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 SLC25A53Q5H9E4 307 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 NEURL2Q9BR09 285 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 VAX2Q9UIW0 290 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 C4orf51C9J302 202 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 HCP5Q6MZN7 132 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 CYB5R1Q9UHQ9 305 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 SCN2AQ99250 2005 aa14.95□□□□□ -0.02
SHANK1-201ENST00000293441 SCTP09683 121 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 FUT5Q11128 374 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 OR8G5Q8NG78 346 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 MARS2Q96GW9 593 aaKnown RBP14.94□□□□□ -0.02
SHANK1-201ENST00000293441 MS4A10Q96PG2 267 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF137PP52743 207 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 MRPL54Q6P161 138 aaKnown RBP14.94□□□□□ -0.02
SHANK1-201ENST00000293441 IGHV3OR16-12A0A075B7B8 117 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 IGHV3OR16-10A0A075B7F0 116 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 MFSD2BA6NFX1 497 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 CCKARP32238 428 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 ANAPC16Q96DE5 110 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 C16orf92Q96LL3 132 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 SIRT4Q9Y6E7 314 aaPredicted RBP14.94□□□□□ -0.02
SHANK1-201ENST00000293441 OVCH2Q7RTZ1 564 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF645Q8N7E2 425 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 KCNK17Q96T54 332 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 VPS25Q9BRG1 176 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 TRAV34A0A0B4J273 112 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 LDLRAD3Q86YD5 345 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 OR10C1Q96KK4 312 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 SNX22Q96L94 193 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 PAXXQ9BUH6 204 aa14.94□□□□□ -0.02
SHANK1-201ENST00000293441 CEACAM18A8MTB9 384 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 LMX1BO60663 402 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 EBLN2Q6P2I7 272 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 GBGT1Q8N5D6 347 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 A1L4Q6 167 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 J3QR89 54 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 IRF3Q14653 427 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 FAM181AQ8N9Y4 354 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 TUBGCP6Q96RT7 1819 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 CGB1A6NKQ9 187 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 CDS2O95674 445 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 ZNF273Q14593 569 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 SPANXN1Q5VSR9 72 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 OR11H7Q8NGC8 314 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 OR4A5Q8NH83 315 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 IGF2P01344 180 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 OR2T10Q8NGZ9 312 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 SIRT7Q9NRC8 400 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 NRXN2Q9P2S2 1712 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 MELTFP08582 738 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 ARF6P62330 175 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 UNQ5815/PRO19632Q6UWF5 114 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 FAM216AQ8WUB2 273 aa14.93□□□□□ -0.02
SHANK1-201ENST00000293441 A0A1W2PP11 408 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 PDE6DO43924 150 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 SFXN3Q9BWM7 321 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 IDI2-AS1Q9NZ38 188 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 PPIAL4CA0A0B4J2A2 164 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 KCNAB3O43448 404 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 ADAM11O75078 769 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 PPIAL4GP0DN37 164 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 AREGP15514 252 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 LIMS1P48059 325 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 OR2D3Q8NGH3 330 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 METTL26Q96S19 204 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 AMELYQ99218 206 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 TMEM229AB2RXF0 380 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 HYPMO75409 117 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 CD1BP29016 333 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 MC5RP33032 325 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 IZUMO4Q1ZYL8 232 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 GTF2H5Q6ZYL4 71 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 STXBP6Q8NFX7 210 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 CSRP2Q16527 193 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 KLF14Q8TD94 323 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-201ENST00000293441 TMEM140Q9NV12 185 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 DOCK3Q8IZD9 2030 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 PDLIM4P50479 330 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 NUBP1P53384 320 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 TM4SF20Q53R12 229 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 GSX1Q9H4S2 264 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-201ENST00000293441 AURKAIP1Q9NWT8 199 aaPredicted RBP14.92□□□□□ -0.02
SHANK1-201ENST00000293441 LEUTXA8MZ59 168 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 DLK1P80370 383 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 MRGPRGQ86SM5 289 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 LEAP2Q969E1 77 aa14.92□□□□□ -0.02
SHANK1-201ENST00000293441 SMPD2O60906 423 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 LRRC75AQ8NAA5 344 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 KCNK7Q9Y2U2 307 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 MAP1BP46821 2468 aaKnown RBP14.91□□□□□ -0.02
SHANK1-201ENST00000293441 LOC105371242A0A075B767 164 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 RRN3P1Q2M238 152 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 MIOXQ9UGB7 285 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 A0A1W2PR77 199 aa14.91□□□□□ -0.02
SHANK1-201ENST00000293441 CRISP2P16562 243 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms