RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
TFF3-201ENST00000291525 ACSM3Q53FZ2 586 aa13.58□□□□□ -0.24
TFF3-201ENST00000291525 RBM48Q5RL73 367 aaKnown RBP13.58□□□□□ -0.24
TFF3-201ENST00000291525 FBLIM1Q8WUP2 373 aa13.58□□□□□ -0.24
TFF3-201ENST00000291525 PHYHIPQ92561 330 aa13.58□□□□□ -0.24
TFF3-201ENST00000291525 TMEM59Q9BXS4 323 aa13.58□□□□□ -0.24
TFF3-201ENST00000291525 MRPL20Q9BYC9 149 aaKnown RBP13.58□□□□□ -0.24
TFF3-201ENST00000291525 KIAA1456Q9P272 454 aa13.58□□□□□ -0.24
TFF3-201ENST00000291525 NBR2O15453 112 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 HLA-DRB1P01911 266 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 CHATP28329 748 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 HMGN3Q15651 99 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 C6orf141Q5SZD1 244 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 OGFRL1Q5TC84 451 aaPredicted RBP13.57□□□□□ -0.24
TFF3-201ENST00000291525 FAM71F2Q6NXP2 309 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 FKBP14Q9NWM8 211 aa13.57□□□□□ -0.24
TFF3-201ENST00000291525 SEC14L6B5MCN3 397 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 LUMP51884 338 aaPredicted RBP13.56□□□□□ -0.24
TFF3-201ENST00000291525 RPS27AP62979 156 aaKnown RBP13.56□□□□□ -0.24
TFF3-201ENST00000291525 RNLSQ5VYX0 342 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 LAIR2Q6ISS4 152 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 ZNF833PQ6ZTB9 187 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 MOB1BQ7L9L4 216 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 ODF3L1Q8IXM7 274 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 WWC2-AS2Q96NR7 200 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 SULT4A1Q9BR01 284 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 TMED9Q9BVK6 235 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 OR51J1Q9H342 316 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 CHMP1AQ9HD42 196 aaPredicted RBP13.56□□□□□ -0.24
TFF3-201ENST00000291525 PARP11Q9NR21 331 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
TFF3-201ENST00000291525 SAA2-SAA4A0A096LPE2 208 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
TFF3-201ENST00000291525 CDK1P06493 297 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 OR8U8P0C7N1 319 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
TFF3-201ENST00000291525 SAA2P0DJI9 122 aaPredicted RBP13.55□□□□□ -0.24
TFF3-201ENST00000291525 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 FHL3Q13643 280 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 C5orf64Q2M2E5 130 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 HSD17B12Q53GQ0 312 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 C1orf100Q5SVJ3 147 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 MYOZ3Q8TDC0 251 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 IL1F10Q8WWZ1 152 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 TM2D1Q9BX74 207 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 VSIG4Q9Y279 399 aa13.55□□□□□ -0.24
TFF3-201ENST00000291525 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 RAB29O14966 203 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 BPNT1O95861 308 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 SRMP19623 302 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 HTR2CP28335 458 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 ECI1P42126 302 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 OR3A3P47888 321 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 INSL3P51460 131 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 RUNX1Q01196 453 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 LIN54Q6MZP7 749 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 C6orf201Q7Z4U5 140 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 LRRTM1Q86UE6 522 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 NPBQ8NG41 125 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 SETD6Q8TBK2 473 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 FAAP24Q9BTP7 215 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 GHITMQ9H3K2 345 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 RIMS4Q9H426 269 aaPredicted RBP13.54□□□□□ -0.24
TFF3-201ENST00000291525 PLEKHJ1Q9NW61 149 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 SCN3BQ9NY72 215 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 MGAT4AQ9UM21 535 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 WSB1Q9Y6I7 421 aa13.54□□□□□ -0.24
TFF3-201ENST00000291525 IGHV7-81A0A0B4J1V7 117 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 NDUFA3O95167 84 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 BLVRBP30043 206 aaPredicted RBP13.53□□□□□ -0.24
TFF3-201ENST00000291525 PPIFP30405 207 aaKnown RBP13.53□□□□□ -0.24
TFF3-201ENST00000291525 RANBP1P43487 201 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 ZNF616Q08AN1 781 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 INSL4Q14641 139 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 SPHARQ15513 63 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 ZNF260Q3ZCT1 412 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 SVOPQ8N4V2 548 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 OR6M1Q8NGM8 313 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 UFD1Q92890 307 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 URM1Q9BTM9 101 aaKnown RBP13.53□□□□□ -0.24
TFF3-201ENST00000291525 IFI27L2Q9H2X8 130 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 SLC23A1Q9UHI7 598 aa13.53□□□□□ -0.24
TFF3-201ENST00000291525 COL7A1Q02388 2944 aa13.52□□□□□ -0.24
TFF3-201ENST00000291525 OR5H14A6NHG9 310 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 PTGES3LE9PB15 166 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 G3V318 75 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 SLC22A1O15245 554 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 ST8SIA5O15466 376 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 NAPSAO96009 420 aa13.52□□□□□ -0.25
TFF3-201ENST00000291525 IGLV1-40P01703 118 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms