RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 FAM90A18PA6NE21 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A16PA6NEW6 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A20PA6NIJ5 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A8PA6NJQ4 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A7PA6NKC0 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A22PA8MWA6 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A12PA8MX19 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A5PA8MXJ8 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A23PA8MXZ1 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 PITX3O75364 302 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 PGLYRP1O75594 196 aaPredicted RBP8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A15PP0C7V4 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A13PP0C7W8 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A14PP0C7W9 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 FAM90A24PP0C7X0 464 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 CD200P41217 278 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 C1orf87Q8N0U7 546 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 TMEM251Q8N6I4 163 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 RBMXL1Q96E39 390 aaKnown RBP8.59□□□□□ -1.03
COPB1-201ENST00000249923 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
COPB1-201ENST00000249923 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
COPB1-201ENST00000249923 SPINK4O60575 86 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 IGHEP01854 428 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 UBE2G2P60604 165 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 RAB1AP62820 205 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 SRSF7Q16629 238 aaKnown RBP eCLIP8.59□□□□□ -1.04
COPB1-201ENST00000249923 SPATA46Q5T0L3 261 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 FAM53AQ6NSI3 398 aaPredicted RBP8.59□□□□□ -1.04
COPB1-201ENST00000249923 C1orf210Q8IVY1 113 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 TVP23CQ96ET8 276 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 SMIM7Q9BQ49 75 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 CBLN4Q9NTU7 201 aa8.59□□□□□ -1.04
COPB1-201ENST00000249923 NBASA2RRP1 2371 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 ZNF729A6NN14 1252 aaPredicted RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 CD300LBA8K4G0 201 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 LAMTOR5O43504 91 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 SELEP16581 610 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 APLNRP35414 380 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 CHRNA7P36544 502 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 CDX1P47902 265 aaPredicted RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 RNPS1Q15287 305 aaKnown RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 OR1C1Q15619 314 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 LTC4SQ16873 150 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 LINC00696Q6ZRV3 163 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 TAAR9Q96RI9 348 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 FAM173AQ9BQD7 235 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 IFNL4K9M1U5 179 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 CHST1O43916 411 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 IGHV2-70P01814 119 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 EGR1P18146 543 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 ZNF266Q14584 549 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 RTP5Q14D33 572 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
COPB1-201ENST00000249923 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 SSX7Q7RTT5 188 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 SAXO1Q8IYX7 474 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 TMEM204Q9BSN7 226 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 TUBA4BQ9H853 241 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 GP6Q9HCN6 339 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 PPP1R3CQ9UQK1 317 aa8.58□□□□□ -1.04
COPB1-201ENST00000249923 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 WDR1O75083 606 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 WISP2O76076 250 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 TK1P04183 234 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 CELA3BP08861 270 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 CLN3Q13286 438 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 RNFT1Q5M7Z0 435 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 MRPL21Q7Z2W9 205 aaKnown RBP8.57□□□□□ -1.04
COPB1-201ENST00000249923 IL22RA2Q969J5 263 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 APOBEC3DQ96AK3 386 aaPredicted RBP8.57□□□□□ -1.04
COPB1-201ENST00000249923 BOKQ9UMX3 212 aaPredicted RBP8.57□□□□□ -1.04
COPB1-201ENST00000249923 DMRT1Q9Y5R6 373 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 EP300Q09472 2414 aaPredicted RBP8.57□□□□□ -1.04
COPB1-201ENST00000249923 DVL1O14640 695 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 GATCO43716 136 aaKnown RBP8.57□□□□□ -1.04
COPB1-201ENST00000249923 PSG2P11465 335 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 DEFA4P12838 97 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 ARL16Q0P5N6 197 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 Q6P435 159 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 C14orf144Q96I85 54 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 TRAV34A0A0B4J273 112 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 A0A1B0GW64 132 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 LNP1A1A4G5 178 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 PPP5D1E7EU14 171 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 MT-CO3P00414 261 aa8.57□□□□□ -1.04
COPB1-201ENST00000249923 VDAC1P21796 283 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms