RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZCCHC14Q8WYQ9 949 aaKnown RBP11.99□□□□□ -0.49
HCFC2-201ENST00000229330 COL25A1Q9BXS0 654 aaPredicted RBP11.99□□□□□ -0.49
HCFC2-201ENST00000229330 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
HCFC2-201ENST00000229330 AUP1Q9Y679 476 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 FGF5P12034 268 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 RNF126Q9BV68 326 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 GREB1LQ9C091 1923 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 OOEPA6NGQ2 149 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 OR10S1Q8NGN2 331 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 MARS2Q96GW9 593 aaKnown RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 OR2J1Q9GZK6 312 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 DOCK3Q8IZD9 2030 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 COL8A1P27658 744 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 COMPP49747 757 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 NGBQ9NPG2 151 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM38BQ9NVV0 291 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM250H0YL14 139 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 LINC01387J3KSC0 135 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM265A0A087WTH1 108 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BKO60814 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BJP06899 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 ORM2P19652 201 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BOP23527 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BBP33778 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BDP58876 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BCP62807 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 RBPJQ06330 500 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST2H2BEQ16778 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-201ENST00000229330 VASH2Q86V25 355 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BHQ93079 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BNQ99877 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H2BMQ99879 126 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 FAM206AQ9NX38 181 aa11.98□□□□□ -0.49
HCFC2-201ENST00000229330 HBZP02008 142 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 LCN2P80188 198 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 AESQ08117 197 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 LINC00596Q86U02 117 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 MIEN1Q9BRT3 115 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 MENTQ9BUN1 341 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
HCFC2-201ENST00000229330 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 EML2O95834 649 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 GUSBP11Q6P575 273 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 TGIF2LYQ8IUE0 185 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
HCFC2-201ENST00000229330 RBP4P02753 201 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 ZNF137PP52743 207 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 SLC23A3Q6PIS1 610 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 TRBV9A0A0B4J1U6 114 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 LOC390937A0A1W2PQ73 354 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 CA11O75493 328 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 AMY1AP04745 511 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 SRIP30626 198 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 KIR2DL1P43626 348 aaPredicted RBP11.97□□□□□ -0.49
HCFC2-201ENST00000229330 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
HCFC2-201ENST00000229330 OR10D3Q8NH80 312 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
HCFC2-201ENST00000229330 TRAV39A0A0B4J263 110 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 NDUFA2O43678 99 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 VENTXO95231 258 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 JOSD1Q15040 202 aaPredicted RBP11.96□□□□□ -0.49
HCFC2-201ENST00000229330 HEPN1Q6WQI6 88 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM116Q8NCL8 245 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 CDC42EP3Q9UKI2 254 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 ZNF646O15015 1829 aaPredicted RBP11.96□□□□□ -0.49
HCFC2-201ENST00000229330 IGHV1OR21-1A0A087WYE8 117 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 SLC22A20A6NK97 555 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 MPDU1O75352 247 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 TBX6O95947 436 aaPredicted RBP11.96□□□□□ -0.49
HCFC2-201ENST00000229330 ATOH7Q8N100 152 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 SF3B5Q9BWJ5 86 aaKnown RBP11.96□□□□□ -0.49
HCFC2-201ENST00000229330 OR2H1Q9GZK4 316 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 TM4SF19Q96DZ7 209 aa11.96□□□□□ -0.49
HCFC2-201ENST00000229330 SIPA1L1O43166 1804 aa11.96□□□□□ -0.5
HCFC2-201ENST00000229330 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.5
HCFC2-201ENST00000229330 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.5
HCFC2-201ENST00000229330 ADTRPQ96IZ2 230 aa11.96□□□□□ -0.5
HCFC2-201ENST00000229330 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.5
HCFC2-201ENST00000229330 ATG2BQ96BY7 2078 aa11.96□□□□□ -0.5
HCFC2-201ENST00000229330 C4orf51C9J302 202 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 PGLYRP1O75594 196 aaPredicted RBP11.95□□□□□ -0.5
HCFC2-201ENST00000229330 IL9P15248 144 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 LGALS4P56470 323 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 NXPH1P58417 271 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 STARD6P59095 220 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 RAC3P60763 192 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 WDR74Q6RFH5 385 aaPredicted RBP11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SFRP2Q96HF1 295 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 DPRXA6NFQ7 191 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 LEPROTL1O95214 131 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SCTP09683 121 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 IL11P20809 199 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 NPY1RP25929 384 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 NMUP48645 174 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms