RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CCDC163A0A0D9SF12 145 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 TNFSF12O43508 249 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 TCF21O43680 179 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 CYB5R3P00387 301 aaPredicted RBP7.46□□□□□ -1.22
VCL-207ENST00000624354 ID3Q02535 119 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 RPS19BP1Q86WX3 136 aaKnown RBP7.46□□□□□ -1.22
VCL-207ENST00000624354 IMMP1LQ96LU5 166 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 SRD5A3Q9H8P0 318 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 OCIAD1Q9NX40 245 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 OTOGLQ3ZCN5 2332 aa7.46□□□□□ -1.22
VCL-207ENST00000624354 CLEC18AA5D8T8 446 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A10PA6NDY2 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A18PA6NE21 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A16PA6NEW6 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A20PA6NIJ5 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A8PA6NJQ4 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A7PA6NKC0 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A22PA8MWA6 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A12PA8MX19 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A5PA8MXJ8 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A23PA8MXZ1 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CHST1O43916 411 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CFIP05156 583 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A15PP0C7V4 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A13PP0C7W8 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A14PP0C7W9 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM90A24PP0C7X0 464 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CEACAM1P13688 526 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 UCP1P25874 307 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CCKARP32238 428 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 NTF4P34130 210 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CLDN15P56746 228 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 TRA2AQ13595 282 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCL-207ENST00000624354 KRTAP27-1Q3LI81 207 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 NMSQ5H8A3 153 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 COA6Q5JTJ3 125 aaKnown RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 SLC25A24Q6NUK1 477 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FAM180AQ6UWF9 173 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 DPPA3Q6W0C5 159 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 Q6ZS49 121 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 P4HA3Q7Z4N8 544 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CLEC18CQ8NCF0 446 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 DIRC2Q96SL1 478 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 ATP5SQ99766 215 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 Q9N2K0 584 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 NXPH3O95157 252 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 TMEM50AO95807 157 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 SCTP09683 121 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 IL24Q13007 206 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 ZNF154Q13106 437 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 ZNF66Q6ZN08 573 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 CLDND2Q8NHS1 167 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 NAT6Q93015 286 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 SIGLEC12Q96PQ1 595 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 GPHA2Q96T91 129 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 LPAR2Q9HBW0 351 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 KIR2DS1A0A191URI9 304 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 A0A1B0GU03 582 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 SLC22A20A6NK97 555 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 ZNF716A6NP11 495 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 SIAH2O43255 324 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CXCL13O43927 109 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 IFNA5P01569 189 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 JMJD7P0C870 316 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 COX6A1P12074 109 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 EPHA8P29322 1005 aaPredicted RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 KIR2DS4P43632 304 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 TAS2R30P59541 319 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 RPS18P62269 152 aaKnown RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 RAB11AP62491 216 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 KIR2DS1Q14954 304 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCL-207ENST00000624354 YRDCQ86U90 279 aaKnown RBP7.45□□□□□ -1.22
VCL-207ENST00000624354 FGFBP3Q8TAT2 258 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 FKBP11Q9NYL4 201 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 PCNX2A6NKB5 2137 aa7.45□□□□□ -1.22
VCL-207ENST00000624354 KIR2DL5BA0A0G2JN68 375 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 KIR2DL5BA0A0G2JPC4 375 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 IRF2P14316 349 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 S100GP29377 79 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 CXCL12P48061 93 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 TLE1Q04724 770 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 RIPPLY2Q5TAB7 128 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SP5Q6BEB4 398 aaPredicted RBP7.44□□□□□ -1.22
VCL-207ENST00000624354 ODF3L1Q8IXM7 274 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 KIR2DL5AQ8N109 375 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 KCNE4Q8WWG9 221 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 HIPK2Q9H2X6 1198 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 CCL28Q9NRJ3 127 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 SPTA1P02549 2419 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 NCOR2Q9Y618 2525 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 IGKV1D-13A0A0B4J2D9 117 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 LNP1A1A4G5 178 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 PPP5D1E7EU14 171 aa7.44□□□□□ -1.22
VCL-207ENST00000624354 NAPSAO96009 420 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms