RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CLEC18BQ6UXF7 455 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CCBE1Q6UXH8 406 aaPredicted RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 Q6ZT83 130 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 NUFIP2Q7Z417 695 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 AKAP14Q86UN6 197 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C1orf174Q8IYL3 243 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 OR51D1Q8NGF3 324 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 OR56B1Q8NGI3 324 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 OR5M9Q8NGP3 310 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 OR5H6Q8NGV6 325 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 SMIM4Q8WVI0 70 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ADAT3Q96EY9 351 aaPredicted RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 BORCS8Q96FH0 119 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 NUDT16L1Q9BRJ7 211 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 TMEM59Q9BXS4 323 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ACTR6Q9GZN1 396 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CHST5Q9GZS9 411 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 METTL9Q9H1A3 318 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 PARLQ9H300 379 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 IFT46Q9NQC8 304 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 RBFOX1Q9NWB1 397 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 ING4Q9UNL4 249 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 NOP16Q9Y3C1 178 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 CACNG2Q9Y698 323 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 SVILO95425 2214 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CSMD2Q7Z408 3487 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 TNRC6AQ8NDV7 1962 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 FREM3P0C091 2139 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 A0A0B4J203 849 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 A0A1B0GTI1 187 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 A0A1B0GVG6 124 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 ANKRD30BLA7E2S9 258 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CTAG2O75638 210 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CRTAPO75718 401 aaPredicted RBP3.86□□□□□ -1.79
VPS29-212ENST00000621131 RAD51DO75771 328 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TSPAN9O75954 239 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TGM6O95932 706 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 NRASP01111 189 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 HLA-HP01893 362 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 MMP7P09237 267 aaPredicted RBP3.86□□□□□ -1.79
VPS29-212ENST00000621131 SFTPCP11686 197 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TUBG1P23258 451 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CPT2P23786 658 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 IL32P24001 234 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 OPRM1P35372 400 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CBX5P45973 191 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 RBP2P50120 134 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TAS2R19P59542 299 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 GNG2P59768 71 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 MZT1Q08AG7 82 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SNTB2Q13425 540 aaKnown RBP3.86□□□□□ -1.79
VPS29-212ENST00000621131 RSU1Q15404 277 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 ACTBL2Q562R1 376 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 GLIPR1L1Q6UWM5 242 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TFAP2EQ6VUC0 442 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 Q6ZSR3 168 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SSX8Q7RTT4 187 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 NRARPQ7Z6K4 114 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 ANGPTL5Q86XS5 388 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SIAH3Q8IW03 269 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 GCNT2Q8N0V5 402 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CHST4Q8NCG5 386 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SLC30A7Q8NEW0 376 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 OR5T2Q8NGG2 359 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 OR51A2Q8NGJ7 313 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 FAM57AQ8TBR7 257 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TNFAIP8L1Q8WVP5 186 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 PIGCQ92535 297 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 CREB3L1Q96BA8 519 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SLC25A38Q96DW6 304 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 C2orf48Q96LS8 159 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 SDHCQ99643 169 aaPredicted RBP3.86□□□□□ -1.79
VPS29-212ENST00000621131 SFXN3Q9BWM7 321 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 Q9H8V8 135 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 ELL3Q9HB65 397 aaPredicted RBP3.86□□□□□ -1.79
VPS29-212ENST00000621131 TUBG2Q9NRH3 451 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 NKIRAS2Q9NYR9 191 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TBC1D24Q9ULP9 559 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 TP53TG5Q9Y2B4 290 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 NUBP2Q9Y5Y2 271 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 MED12Q93074 2177 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 MED13LQ71F56 2210 aa3.86□□□□□ -1.79
VPS29-212ENST00000621131 hCG_38984A0A1B0GV85 526 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 FAM230AA0A1W2PPH8 454 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 A6NIN4 97 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 DISC1C4P0D8 188 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PRAF2O60831 178 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 IGLV3-1P01715 115 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 CD3GP09693 182 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 AKAIN1P0CW23 69 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 TRAPPC2P0DI81 140 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 TRAPPC2BP0DI82 140 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 CD37P11049 281 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 GTF2F2P13984 249 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 TBPP20226 339 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 SERPINA2P20848 420 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PTGFRP43088 359 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms