RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 ZNF546Q86UE3 836 aa17.07■□□□□ 0.32
SDHA-220ENST00000617470 ZNF680Q8NEM1 530 aa17.07■□□□□ 0.32
SDHA-220ENST00000617470 SECTM1Q8WVN6 248 aa17.07■□□□□ 0.32
SDHA-220ENST00000617470 SHARPINQ9H0F6 387 aa17.07■□□□□ 0.32
SDHA-220ENST00000617470 METTL8Q9H825 291 aaKnown RBP17.07■□□□□ 0.32
SDHA-220ENST00000617470 COMMD9Q9P000 198 aa17.07■□□□□ 0.32
SDHA-220ENST00000617470 UNC79Q9P2D8 2635 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 IGHV1-69-2A0A0G2JMI3 117 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 LYNX1G3V0Z9 82 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 SNAPC5O75971 98 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 LYNX1P0DP58 116 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 PSG2P11465 335 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 S100A11P31949 105 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 GATA4P43694 442 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 TGIF2LYQ8IUE0 185 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 UBALD1Q8TB05 177 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 GLYATL2Q8WU03 294 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 CCL17Q92583 94 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 MSI2Q96DH6 328 aaKnown RBP17.06■□□□□ 0.32
SDHA-220ENST00000617470 PERPQ96FX8 193 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 LURAP1Q96LR2 239 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 MFFQ9GZY8 342 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 TNFSF18Q9UNG2 199 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 IGKV1D-17A0A075B6S4 117 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 TMEM30CPA0ZSE6 113 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 H0YIZ8 118 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 MPPED1O15442 326 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 PSMB6P28072 239 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 EFNA4P52798 201 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 ATP5J2P56134 94 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 AESQ08117 197 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 SLC35E4Q6ICL7 350 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 OR10J5Q8NHC4 309 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 IL1F10Q8WWZ1 152 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 C2orf50Q96LR7 162 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 TP53RKQ96S44 253 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 RNF126Q9BV68 326 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 SLC5A7Q9GZV3 580 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 KCNIP3Q9Y2W7 256 aa17.06■□□□□ 0.32
SDHA-220ENST00000617470 APCP25054 2843 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 POLQO75417 2590 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 F12P00748 615 aaPredicted RBP17.05■□□□□ 0.32
SDHA-220ENST00000617470 DAOP14920 347 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 S100A1P23297 94 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 PRDX2P32119 198 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 RND3P61587 244 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 CYCSP99999 105 aaKnown RBP17.05■□□□□ 0.32
SDHA-220ENST00000617470 LRTM2Q8N967 370 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
SDHA-220ENST00000617470 LHFPL5Q8TAF8 219 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 GPHA2Q96T91 129 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 SUCNR1Q9BXA5 334 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 TAF9BQ9HBM6 251 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 CCL28Q9NRJ3 127 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 MBD2Q9UBB5 411 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 KIF25Q9UIL4 384 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 OR2W1Q9Y3N9 320 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 BAHCC1Q9P281 2608 aa17.05■□□□□ 0.32
SDHA-220ENST00000617470 ZNF737O75373 536 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 IGHV4-39P01824 125 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 IRF2P14316 349 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 COL8A2P25067 703 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 LIAT1Q6ZQX7 453 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 FAM219AQ8IW50 185 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 PRR18Q8N4B5 295 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 CCDC71LQ8N9Z2 235 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 IGHV3OR15-7A0A075B7D8 119 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 RNF222A6NCQ9 220 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 GPR31O00270 319 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 HFEQ30201 348 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 GGNBP1Q5YKI7 109 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 FAM90A1Q86YD7 464 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 ZNF565Q8N9K5 539 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 ERGIC1Q969X5 290 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 C18orf12Q96KH6 178 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 ARL6Q9H0F7 186 aa17.04■□□□□ 0.32
SDHA-220ENST00000617470 PARP12Q9H0J9 701 aaKnown RBP17.04■□□□□ 0.32
SDHA-220ENST00000617470 LRRC30A6NM36 301 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 CYB5R3P00387 301 aaPredicted RBP17.03■□□□□ 0.32
SDHA-220ENST00000617470 HEXAP06865 529 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 HTR2BP41595 481 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 TBC1D26Q86UD7 250 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 FAM185AQ8N0U4 392 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 SEBOXQ9HB31 216 aaPredicted RBP17.03■□□□□ 0.32
SDHA-220ENST00000617470 DCAF16Q9NXF7 216 aa17.03■□□□□ 0.32
SDHA-220ENST00000617470 C3orf85A0A1B0GTC6 90 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 C12orf77C9JDV5 145 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 HSD17B6O14756 317 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 PHF1O43189 567 aaPredicted RBP17.02■□□□□ 0.32
SDHA-220ENST00000617470 KCNAB3O43448 404 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 C4BPBP20851 252 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 GLIPR1P48060 266 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 AP2S1P53680 142 aaPredicted RBP17.02■□□□□ 0.32
SDHA-220ENST00000617470 EXOSC2Q13868 293 aaKnown RBP17.02■□□□□ 0.32
SDHA-220ENST00000617470 FAM201AQ5SY85 155 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 LYZL2Q7Z4W2 148 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 RNF7Q9UBF6 113 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 KIAA2026Q5HYC2 2103 aa17.02■□□□□ 0.32
SDHA-220ENST00000617470 CSMD2Q7Z408 3487 aa17.02■□□□□ 0.31
SDHA-220ENST00000617470 IGLV2-14P01704 120 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms