RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	SAA2-SAA4	A0A096LPE2	208 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	IGKV1-12	A0A0C4DH73	117 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	SHISA7	A6NL88	538 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236		A8MXE2	369 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	SPRY1	O43609	319 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	PRKN	O60260	465 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	WISP1	O95388	367 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	IL18BP	O95998	194 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	IGKV1D-12	P01611	117 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	LIF	P15018	202 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	SRD5A2	P31213	254 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	NXPH1	P58417	271 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	RPL15	P61313	204 aa	Known RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	RUNX1	Q01196	453 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	CATR1	Q13166	79 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	SNAI3	Q3KNW1	292 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	PIGY	Q3MUY2	71 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	LCN15	Q6UWW0	184 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	C5orf24	Q7Z6I8	188 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	ZDHHC23	Q8IYP9	409 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	PSMF1	Q92530	271 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	JSRP1	Q96MG2	331 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	RASL10B	Q96S79	203 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	SNHG12	Q9BXW3	62 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	TMEM106B	Q9NUM4	274 aa		10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.03	□□□□□ -0.8
U2AF1L4-221	ENST00000601236		A0A1W2PNR3	127 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236		C9JCJ5	164 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236		E9PLN8	166 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ANGPTL7	O43827	346 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	GYPA	P02724	150 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	MPL	P40238	635 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ATP5I	P56385	69 aa	Predicted RBP	10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF726P1	Q15940	193 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RTL8B	Q17RB0	113 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	AARD	Q4LEZ3	155 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	PDZD11	Q5EBL8	140 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	FAM162B	Q5T6X4	162 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	PCSK4	Q6UW60	755 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	P4HA3	Q7Z4N8	544 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZIC4	Q8N9L1	334 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	SUMF1	Q8NBK3	374 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10G3	Q8NGC4	313 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10P1	Q8NGE3	313 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR2AE1	Q8NHA4	323 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	FOXB1	Q99853	325 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	DUSP23	Q9BVJ7	150 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	TRAPPC1	Q9Y5R8	145 aa		10.02	□□□□□ -0.81
U2AF1L4-221	ENST00000601236		A0A1B0GV50	99 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF891	A8MT65	544 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	FNDC10	F2Z333	226 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	SCGB1D1	O95968	90 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	HPRT1	P00492	218 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	MDK	P21741	143 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ARR3	P36575	388 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	C4orf17	Q53FE4	359 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF542P	Q5EBM4	170 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10J3	Q5JRS4	329 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	PRAMEF20	Q5VT98	475 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	CDPF1	Q6NVV7	123 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RASL11A	Q6T310	242 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	NUFIP2	Q7Z417	695 aa	Known RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RPP25L	Q8N5L8	163 aa	Known RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10G9	Q8NGN4	311 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10G7	Q8NGN6	311 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR5B3	Q8NH48	314 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	CMTM2	Q8TAZ6	248 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RPUSD4	Q96CM3	377 aa	Known RBP	10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	SDSL	Q96GA7	329 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR4C12	Q96R67	309 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RNF2	Q99496	336 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	SH2D2A	Q9NP31	389 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	CCL28	Q9NRJ3	127 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	CACNG5	Q9UF02	275 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RARRES3	Q9UL19	164 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	FUT9	Q9Y231	359 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZFP30	Q9Y2G7	519 aa		10.01	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	IGKV3D-15	A0A087WSY6	115 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	TRAV39	A0A0B4J263	110 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	MDFIC2	A0A1B0GVS7	189 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236		A0A1W2PPQ1	181 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	LRRC3C	A6NJW4	275 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF814	B7Z6K7	855 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236		G3V3Y1	287 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	RAB29	O14966	203 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	SS18L1	O75177	396 aa	Predicted RBP	10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	CA3	P07451	260 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	UMOD	P07911	640 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	OR10J4	P0C629	311 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF32	P17041	273 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	TMPRSS3	P57727	454 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	GNG3	P63215	75 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	PLGLB1	Q02325	96 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	FAM69B	Q5VUD6	431 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	ZNF774	Q6NX45	483 aa		10	□□□□□ -0.81
U2AF1L4-221	ENST00000601236	TRAT1	Q6PIZ9	186 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms