RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PDZD9Q8IXQ8 264 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 PRR18Q8N4B5 295 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 OR1L1Q8NH94 360 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 SLC6A7Q99884 636 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 OCSTAMPQ9BR26 566 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 HDHD3Q9BSH5 251 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 MEGF9Q9H1U4 602 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 MMP28Q9H239 520 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 MMP27Q9H306 513 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 SCPEP1Q9HB40 452 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 ZNF286AQ9HBT8 521 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 DPM3Q9P2X0 92 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 PSG11Q9UQ72 335 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 POMT1Q9Y6A1 747 aa13.46□□□□□ -0.25
SHKBP1-219ENST00000599575 JMJD1CQ15652 2540 aa13.46□□□□□ -0.26
SHKBP1-219ENST00000599575 A0A0U1RQK1 487 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 DPPA5A6NC42 116 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 FAM25AB3EWG3 89 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 FAM25CB3EWG5 89 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 FAM25GB3EWG6 89 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 RGS5O15539 181 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 FABP7O15540 132 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 DLX1P56177 255 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 TAS2R20P59543 309 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 CCDC144NLQ6NUI1 221 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 Q6YL49 198 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 Q6ZPA2 131 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 ZFAND2BQ8WV99 257 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 SSMEM1Q8WWF3 244 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 EDARADDQ8WWZ3 215 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 C22orf15Q8WYQ4 148 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 DPAGT1Q9H3H5 408 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
SHKBP1-219ENST00000599575 VGLL3A8MV65 326 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 BUB1B-PAK6H3BSN5 160 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 SULT1C2O00338 296 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 IL3RAP26951 378 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 PRSS3P35030 304 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 DYNLT3P51808 116 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 MADCAM1Q13477 382 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 MORN2Q502X0 79 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 OR5R1Q8NH85 324 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 IL1F10Q8WWZ1 152 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 CABLES2Q9BTV7 478 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 TOLLIPQ9H0E2 274 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 ZNRD1Q9P1U0 126 aa13.44□□□□□ -0.26
SHKBP1-219ENST00000599575 HSPA12AO43301 675 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 HLA-DQB1P01920 261 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 LPLP06858 475 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 RAB7AP51149 207 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 MRPS10P82664 201 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 LTC4SQ16873 150 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 HOGA1Q86XE5 327 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 SIGLECL1Q8N7X8 197 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 ZNF439Q8NDP4 499 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 OR10X1Q8NGY0 326 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 NUDCD2Q8WVJ2 157 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 CYYR1Q96J86 154 aa13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-219ENST00000599575 TRBV6-7A0A0A0MS04 114 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 BTBD17A6NE02 478 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 CTDSP2O14595 271 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 TXNL1O43396 289 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 SSX5O60225 188 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 SCTP09683 121 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 ZNF137PP52743 207 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 PRB3Q04118 309 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 BAMBIQ13145 260 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 CNIH2Q6PI25 160 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 OR2AK2Q8NG84 335 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 OR10J5Q8NHC4 309 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 ZNF48Q96MX3 618 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 ST6GALNAC5Q9BVH7 336 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 EXTL2Q9UBQ6 330 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 ANXA10Q9UJ72 324 aa13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 ELF5Q9UKW6 265 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-219ENST00000599575 S100A5P33763 92 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 IER3P46695 156 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 RPL15P61313 204 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 LAX1Q8IWV1 398 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 BEST4Q8NFU0 473 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 OR52L2PQ8NGH6 319 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 UBALD1Q8TB05 177 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 DCUN1D5Q9BTE7 237 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 ABHD14AQ9BUJ0 271 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 MIXL1Q9H2W2 232 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 SLC23A1Q9UHI7 598 aa13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 ZNF230Q9UIE0 474 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-219ENST00000599575 MRPS7Q9Y2R9 242 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms