RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SSX1Q16384 188 aa18.02■□□□□ 0.48
CCDC9-204ENST00000599398 NSUN5P1Q3KNT7 163 aa18.02■□□□□ 0.48
CCDC9-204ENST00000599398 Q3ZCU0 254 aa18.02■□□□□ 0.48
CCDC9-204ENST00000599398 URM1Q9BTM9 101 aaKnown RBP18.02■□□□□ 0.48
CCDC9-204ENST00000599398 OR2S2Q9NQN1 319 aa18.02■□□□□ 0.48
CCDC9-204ENST00000599398 MBNL3Q9NUK0 354 aaKnown RBP18.02■□□□□ 0.48
CCDC9-204ENST00000599398 IGHV1-3A0A0C4DH29 117 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 SLC31A2O15432 143 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 AMY1AP04745 511 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 AMY2AP04746 511 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 EMX1Q04741 257 aaPredicted RBP18.01■□□□□ 0.47
CCDC9-204ENST00000599398 OR2W3Q7Z3T1 314 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 SVOPQ8N4V2 548 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 CHMP1AQ9HD42 196 aaPredicted RBP18.01■□□□□ 0.47
CCDC9-204ENST00000599398 PLEKHJ1Q9NW61 149 aa18.01■□□□□ 0.47
CCDC9-204ENST00000599398 IGHV3-72A0A0B4J1Y9 119 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 CLDN12P56749 244 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 SLC25A48Q6ZT89 311 aaKnown RBP18■□□□□ 0.47
CCDC9-204ENST00000599398 C5orf24Q7Z6I8 188 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 CENPVQ7Z7K6 275 aaPredicted RBP18■□□□□ 0.47
CCDC9-204ENST00000599398 OR51D1Q8NGF3 324 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 LPAR5Q9H1C0 372 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 V9GY05 133 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 NOTCH1P46531 2555 aa18■□□□□ 0.47
CCDC9-204ENST00000599398 A0A0A6YYD4 124 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 DENRO43583 198 aaKnown RBP17.99■□□□□ 0.47
CCDC9-204ENST00000599398 MRPS14O60783 128 aaKnown RBP17.99■□□□□ 0.47
CCDC9-204ENST00000599398 ZNF134P52741 427 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 CT45A1Q5HYN5 189 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 ZNF554Q86TJ5 538 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 ZNF439Q8NDP4 499 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 OR5AU1Q8NGC0 362 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 OR52L2PQ8NGH6 319 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 CT45A3Q8NHU0 189 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 SETD6Q8TBK2 473 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 WIPF2Q8TF74 440 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-204ENST00000599398 RTN4IP1Q8WWV3 396 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-204ENST00000599398 CITED2Q99967 270 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-204ENST00000599398 NDUFB11Q9NX14 153 aa17.99■□□□□ 0.47
CCDC9-204ENST00000599398 SOCS1O15524 211 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 PSMD7P51665 324 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 GNMTQ14749 295 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 MORN2Q502X0 79 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 HES5Q5TA89 166 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 TGIF2LXQ8IUE1 241 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 ST6GALNAC6Q969X2 333 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 FAM3DQ96BQ1 224 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 GALMQ96C23 342 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 ABRACLQ9P1F3 81 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
CCDC9-204ENST00000599398 PDCD5O14737 125 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 MYL9P24844 172 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 PPP1CCP36873 323 aaKnown RBP17.97■□□□□ 0.47
CCDC9-204ENST00000599398 RANBP1P43487 201 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 DEFA6Q01524 100 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 NDUFA11Q86Y39 141 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 LRRC42Q9Y546 428 aa17.97■□□□□ 0.47
CCDC9-204ENST00000599398 PSMB9P28065 219 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 VEGFCP49767 419 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 HTD2P86397 168 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 HMGN3Q15651 99 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 C2orf76Q3KRA6 126 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 IZUMO1Q8IYV9 350 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 SPARTQ8N0X7 666 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 C5orf56Q8N8D9 126 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 OR2T10Q8NGZ9 312 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 IL1F10Q8WWZ1 152 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 EAF1Q96JC9 268 aaPredicted RBP17.96■□□□□ 0.47
CCDC9-204ENST00000599398 ABHD14AQ9BUJ0 271 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 STEAP1Q9UHE8 339 aa17.96■□□□□ 0.47
CCDC9-204ENST00000599398 TRAV1-2A0A0B4J238 106 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 TRDV1A0A1B0GX56 115 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 NCBP2LA6PVI3 153 aaKnown RBP17.95■□□□□ 0.46
CCDC9-204ENST00000599398 FGF16O43320 207 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 TXNL1O43396 289 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 RGS11O94810 467 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 NAPSAO96009 420 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 EBI3Q14213 229 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 UBE2UQ5VVX9 321 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 STEAP3Q658P3 488 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 CD200R1LQ6Q8B3 271 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 FAM89BQ8N5H3 189 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 YTHDF1Q9BYJ9 559 aaKnown RBP17.95■□□□□ 0.46
CCDC9-204ENST00000599398 AK3Q9UIJ7 227 aa17.95■□□□□ 0.46
CCDC9-204ENST00000599398 A0A1W2PRX2 142 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 CD1BP29016 333 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 ZNF137PP52743 207 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 OR10A3P58181 314 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 C22orf42Q6IC83 251 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 MOB1BQ7L9L4 216 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 OR56B1Q8NGI3 324 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 R3HDM4Q96D70 268 aa17.94■□□□□ 0.46
CCDC9-204ENST00000599398 HDHD3Q9BSH5 251 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-204ENST00000599398 RIMS4Q9H426 269 aaPredicted RBP17.94■□□□□ 0.46
CCDC9-204ENST00000599398 TMEM272A0A1B0GTI8 110 aa17.93■□□□□ 0.46
CCDC9-204ENST00000599398 SHISA3A0PJX4 238 aa17.93■□□□□ 0.46
CCDC9-204ENST00000599398 ZNF736B4DX44 427 aaPredicted RBP17.93■□□□□ 0.46
CCDC9-204ENST00000599398 WIPF1O43516 503 aa17.93■□□□□ 0.46
CCDC9-204ENST00000599398 YPEL1O60688 119 aa17.93■□□□□ 0.46
CCDC9-204ENST00000599398 OPN1MWP04001 364 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms