RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 HES1Q14469 280 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 HNF4GQ14541 408 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 PNLIPRP3Q17RR3 467 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 TRAT1Q6PIZ9 186 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 ADAMTSL5Q6ZMM2 481 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 ZNF497Q6ZNH5 498 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 DRAM1Q8N682 238 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 C8orf31Q8N9H6 132 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 RFESDQ8TAC1 157 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 VCX3BQ9H321 246 aa13.54□□□□□ -0.24
RETREG3-210ENST00000590541 A0A1W2PPK0 400 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 PTGES3LE9PB15 166 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 MT-ND4P03905 459 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 UBBP0CG47 229 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 SSTR5P35346 364 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 FHL3Q13643 280 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 DIAPH2-AS1Q14236 149 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 SPHARQ15513 63 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 LYPD6Q86Y78 171 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 OR10X1Q8NGY0 326 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 PHYHIPQ92561 330 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
RETREG3-210ENST00000590541 A0A1W2PP11 408 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 C15orf65H3BRN8 121 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 AIPO00170 330 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 AP4M1O00189 453 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 CCRL2O00421 344 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 IGKV1D-33P01593 117 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 IGKV1-33P01594 117 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 FRMD6-AS1P0C7T7 363 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 MGMTP16455 207 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 FUT3P21217 361 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 GABPB1Q06547 395 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-210ENST00000590541 ACSM3Q53FZ2 586 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 CXorf66Q5JRM2 361 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-210ENST00000590541 C6orf183Q5T699 404 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 LINC00311Q8N616 119 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 CST11Q9H112 138 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 ZMAT4Q9H898 229 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 NKX1-2Q9UD57 310 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-210ENST00000590541 TRAPPC2LQ9UL33 140 aa13.52□□□□□ -0.25
RETREG3-210ENST00000590541 SPINT2O43291 252 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 CRTAPO75718 401 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-210ENST00000590541 SC5DO75845 299 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 GAPDHP04406 335 aaKnown RBP13.51□□□□□ -0.25
RETREG3-210ENST00000590541 GPR12P47775 334 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 INSL3P51460 131 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-210ENST00000590541 FOXE3Q13461 319 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 LTC4SQ16873 150 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 GLT8D1Q68CQ7 371 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 GAPTQ8N292 157 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 LEAP2Q969E1 77 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 Q96M66 194 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 SELENOIQ9C0D9 397 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 ETAA1Q9NY74 926 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 PEX16Q9Y5Y5 336 aa13.51□□□□□ -0.25
RETREG3-210ENST00000590541 SDCBPO00560 298 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-210ENST00000590541 IGHV3-7P01780 117 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 ELANEP08246 267 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 MYF6P23409 242 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 IL3RAP26951 378 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 RANBP1P43487 201 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 GNG10P50151 68 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 AQP4P55087 323 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 SYT6Q5T7P8 510 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-210ENST00000590541 STEAP3Q658P3 488 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 ABCG5Q9H222 651 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 GFOD1Q9NXC2 390 aa13.5□□□□□ -0.25
RETREG3-210ENST00000590541 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
RETREG3-210ENST00000590541 TRAV39A0A0B4J263 110 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 HSD17B6O14756 317 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 TXNL1O43396 289 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 SRMP19623 302 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 HSPA13P48723 471 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 CFHR3Q02985 330 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 EBI3Q14213 229 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 IRF3Q14653 427 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 MED22Q15528 200 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 TRAM1Q15629 374 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 CCDC107Q8WV48 283 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 NRG4Q8WWG1 115 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 UFD1Q92890 307 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 ANKRD60Q9BZ19 345 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 BANF2Q9H503 90 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 DUSP21Q9H596 190 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
RETREG3-210ENST00000590541 PDCD6O75340 191 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms