RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 LAMP3Q9UQV4 416 aa7.85□□□□□ -1.15
VPS25-205ENST00000590339 OR2W1Q9Y3N9 320 aa7.85□□□□□ -1.15
VPS25-205ENST00000590339 RNF115Q9Y4L5 304 aa7.85□□□□□ -1.15
VPS25-205ENST00000590339 AKAP9Q99996 3911 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.15
VPS25-205ENST00000590339 ABCA4P78363 2273 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TRAV39A0A0B4J263 110 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 RNF222A6NCQ9 220 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 C5orf51A6NDU8 294 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 OOEPA6NGQ2 149 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 MPTX1A8MV57 137 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 C12orf77C9JDV5 145 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 SMAD7O15105 426 aaKnown RBP7.84□□□□□ -1.15
VPS25-205ENST00000590339 MPPED1O15442 326 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 ARPC5O15511 151 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TFF1P04155 84 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 OR4A8P0C604 315 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TNFSF4P23510 183 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 S100A11P31949 105 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 PRDX2P32119 198 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 RIPPLY3P57055 190 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 SRPXP78539 464 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 C6orf183Q5T699 404 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 STUMQ69YW2 141 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 ADAM5Q6NVV9 412 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 ZNF818PQ6ZRF7 136 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TMUB2Q71RG4 321 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 KCNRGQ8N5I3 272 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 BVESQ8NE79 360 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 ANGPTL6Q8NI99 470 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 LHFPL5Q8TAF8 219 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 GLYATL2Q8WU03 294 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 SEC22AQ96IW7 307 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 C18orf12Q96KH6 178 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 OR10C1Q96KK4 312 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 Q96MF0 132 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
VPS25-205ENST00000590339 TMEM204Q9BSN7 226 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 SLC5A7Q9GZV3 580 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 NCOR1P1Q9H4R4 102 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TAF9BQ9HBM6 251 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 GCM1Q9NP62 436 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 RDH8Q9NYR8 311 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 COMMD9Q9P000 198 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 RNF7Q9UBF6 113 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 TRAPPC2LQ9UL33 140 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 KCNIP3Q9Y2W7 256 aa7.84□□□□□ -1.15
VPS25-205ENST00000590339 DUXBA0A1W2PPF3 345 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 FAM25EA8MYX2 175 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 E7EQL1 145 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 H0Y980 276 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 H0YIZ8 118 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 OR2F2O95006 317 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 HEXAP06865 529 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 UCP1P25874 307 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 PSMB6P28072 239 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 CD80P33681 288 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 OR2F1Q13607 317 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 EFNB3Q15768 340 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 MSMO1Q15800 293 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 FAM209AQ5JX71 171 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TEX36Q5VZQ5 186 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 GGNBP1Q5YKI7 109 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 PRSS54Q6PEW0 395 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TRAT1Q6PIZ9 186 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TBC1D26Q86UD7 250 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 LGI3Q8N145 548 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 LRRC75A-AS1Q8N1F1 130 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 CIARTQ8N365 385 aaPredicted RBP7.83□□□□□ -1.16
VPS25-205ENST00000590339 ZNF565Q8N9K5 539 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 OR10V1Q8NGI7 309 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 SDSLQ96GA7 329 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 SNX22Q96L94 193 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TMEM56Q96MV1 263 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TP53RKQ96S44 253 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 MFFQ9GZY8 342 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 CCL28Q9NRJ3 127 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 MBD2Q9UBB5 411 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 DNAJB11Q9UBS4 358 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 TMEM56-RWDD3S4R434 201 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 U3KQ87 197 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 ANKRD17O75179 2603 aaKnown RBP7.83□□□□□ -1.16
VPS25-205ENST00000590339 DSCAML1Q8TD84 2053 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 HIVEP1P15822 2718 aa7.83□□□□□ -1.16
VPS25-205ENST00000590339 IGHV3OR15-7A0A075B7D8 119 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 A0A0D9SG52 128 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 C3orf85A0A1B0GTC6 90 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 C13orf42A0A1B0GVH6 325 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 C15orf65H3BRN8 121 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 K7N7A8 449 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 MGST3O14880 152 aa7.82□□□□□ -1.16
VPS25-205ENST00000590339 PHF1O43189 567 aaPredicted RBP7.82□□□□□ -1.16
VPS25-205ENST00000590339 DSCAMO60469 2012 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms