RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CEP19Q96LK0 163 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 TEAD3Q99594 435 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FAM110AQ9BQ89 295 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 PRRG3Q9BZD7 231 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FGF23Q9GZV9 251 aaPredicted RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 HES4Q9HCC6 221 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 GPR173Q9NS66 373 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 FAM206AQ9NX38 181 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 PRELID1Q9Y255 219 aa4.41□□□□□ -1.7
DNMT1-220ENST00000589351 AMMECR1Q9Y4X0 333 aaPredicted RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 SIRT4Q9Y6E7 314 aaPredicted RBP4.41□□□□□ -1.7
DNMT1-220ENST00000589351 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 TRAV25A0A0B4J276 109 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 SERPINE3A8MV23 424 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 SH2D1BO14796 132 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ZNF737O75373 536 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 CLN5O75503 358 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 FAM107AO95990 144 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 HAND1O96004 215 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 IGLV3-1P01715 115 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OCM2P0CE71 109 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OCMP0CE72 109 aaPredicted RBP4.4□□□□□ -1.71
DNMT1-220ENST00000589351 VPREB1P12018 145 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ERP29P30040 261 aaKnown RBP4.4□□□□□ -1.71
DNMT1-220ENST00000589351 POU3F4P49335 361 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 RBP2P50120 134 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 HCCSP53701 268 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ATP1B3P54709 279 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ELLP55199 621 aaPredicted RBP4.4□□□□□ -1.71
DNMT1-220ENST00000589351 CDC42P60953 191 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ERVK11-1P61568 191 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 APOFQ13790 326 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 HES1Q14469 280 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 TCTEX1D4Q5JR98 221 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 C9orf66Q5T8R8 295 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 TMEM42Q69YG0 159 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 BTNL8Q6UX41 500 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 HEPN1Q6WQI6 88 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 NRARPQ7Z6K4 114 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 ANGPTL5Q86XS5 388 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 IQCF1Q8N6M8 205 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OR4P4Q8NGL7 312 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OR5M8Q8NGP6 311 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OR4A16Q8NH70 328 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 TMEM170AQ8WVE7 144 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 TFAP2CQ92754 450 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 RFKQ969G6 155 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 RAB40CQ96S21 281 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 NIPSNAP1Q9BPW8 284 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 CADM1Q9BY67 442 aaKnown RBP4.4□□□□□ -1.71
DNMT1-220ENST00000589351 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 OR52A1Q9UKL2 312 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 RNF24Q9Y225 148 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 MOB4Q9Y3A3 225 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 R4GMQ9 66 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 HSPE1-MOB4S4R3N1 261 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 V9GYS6 101 aa4.4□□□□□ -1.71
DNMT1-220ENST00000589351 A0A087X0K7 114 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 ZNF670-ZNF695F2Z2N8 137 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 BUB1B-PAK6H3BSN5 160 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 SYT7O43581 403 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 TTRP02766 147 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CSN3P07498 182 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 MRPL3P09001 348 aaKnown RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CDK2P24941 298 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CD24P25063 80 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 OR3A4PP47883 348 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 P2RX3P56373 397 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 RAB25P57735 213 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CXCR4P61073 352 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CDK5Q00535 292 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 SPIN3Q5JUX0 258 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 LDLRAD2Q5SZI1 272 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 PRAMEF5Q5TYX0 476 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 PYHIN1Q6K0P9 492 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 ZNF322Q6U7Q0 402 aaPredicted RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 SIGLEC15Q6ZMC9 328 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 SLC25A26Q70HW3 274 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 ZNF695Q8IW36 515 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CADM3Q8N126 398 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 FAM58AQ8N1B3 248 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 TPRX1Q8N7U7 411 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 KLHL30-AS1Q8NEE0 82 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 GLYATL2Q8WU03 294 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 RPEQ96AT9 228 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CNN2Q99439 309 aaKnown RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 ANKRD60Q9BZ19 345 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 CHST6Q9GZX3 395 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 RHOFQ9HBH0 211 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 EXOSC4Q9NPD3 245 aaKnown RBP4.39□□□□□ -1.71
DNMT1-220ENST00000589351 TAS2R1Q9NYW7 299 aa4.39□□□□□ -1.71
DNMT1-220ENST00000589351 TVP23BQ9NYZ1 205 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms