RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 DIRC3C9JPN6 131 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 NDUFS4O43181 175 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MLNRO43193 412 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 HCRTO43612 131 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MPZL1O95297 269 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 HLA-AP01891 365 aaKnown RBP4.8□□□□□ -1.64
LINC01538-201ENST00000588074 REG1AP05451 166 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 OR1Q1Q15612 314 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 ADIRFQ15847 76 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MFSD12Q6NUT3 480 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 SLC25A42Q86VD7 318 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 LRRC75A-AS1Q8N1F1 130 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 BCORP1Q8N888 145 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 OR6N2Q8NGY6 317 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 GPR21Q99679 349 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
LINC01538-201ENST00000588074 CHST6Q9GZX3 395 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 TMEM126AQ9H061 195 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 DLL3Q9NYJ7 618 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 RALYQ9UKM9 306 aaKnown RBP4.8□□□□□ -1.64
LINC01538-201ENST00000588074 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 NRXN2Q9P2S2 1712 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 TRAV8-6A0A0B4J262 113 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 A6NDN8 102 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 P2RY10O00398 339 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 SFT2D2O95562 160 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 HLA-HP01893 362 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 CRYGBP07316 175 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
LINC01538-201ENST00000588074 S100A3P33764 101 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 ADRA1AP35348 466 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 CFHR2P36980 270 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 KIR2DS4P43632 304 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 LCN2P80188 198 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 EFNB3Q15768 340 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 BVES-AS1Q5T3Y7 98 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 ARL9Q6T311 187 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MOB1BQ7L9L4 216 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 BHLHA9Q7RTU4 235 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 H2BFWTQ7Z2G1 175 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MRGPREQ86SM8 312 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 LINC00471Q8N535 108 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF611Q8N823 705 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 Q8N976 141 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 CDRT4Q8N9R6 151 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 C16orf52Q8NHV5 167 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 TMEM37Q8WXS4 190 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 PP6455Q8WZ26 134 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 NEIL2Q969S2 332 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 PCED1BQ96HM7 432 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 HSPB9Q9BQS6 159 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 MED29Q9NX70 200 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 TVP23BQ9NYZ1 205 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 WSB1Q9Y6I7 421 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF780BQ9Y6R6 833 aa4.8□□□□□ -1.64
LINC01538-201ENST00000588074 BORCS7-ASMTA0A0B4J1R7 106 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 hADV38S2A0JD32 116 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 MBLAC1A4D2B0 266 aaPredicted RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 C21orf140B9A014 251 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 SAP18O00422 153 aaKnown RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 CYB5AP00167 134 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 CEBPBP17676 345 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 PRDX2P32119 198 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 SRP14P37108 136 aaKnown RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 PGGT1BP53609 377 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 PITX1P78337 314 aaPredicted RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 TMEM78Q5T7P6 136 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 AGTRAPQ6RW13 159 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 TTC9CQ8N5M4 171 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 ZDHHC22Q8N966 263 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 OR10V1Q8NGI7 309 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 OR6T1Q8NGN1 323 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 OR4F5Q8NH21 305 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 HPDLQ96IR7 371 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 NRTNQ99748 197 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 RTBDNQ9BSG5 229 aaPredicted RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 WDR61Q9GZS3 305 aaKnown RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 MFSD1Q9H3U5 465 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 WNT6Q9Y6F9 365 aa4.79□□□□□ -1.64
LINC01538-201ENST00000588074 COL2A1P02458 1487 aaPredicted RBP4.79□□□□□ -1.64
LINC01538-201ENST00000588074 MIA3Q5JRA6 1907 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 A0A087WUU8 490 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 A0A1B0GUS0 222 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 OR51F1A6NGY5 319 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 MSGN1A6NI15 193 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 H0YIZ8 118 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 TAPBPO15533 448 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 SYNGR3O43761 229 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 NEURL1O76050 574 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 GAGE7O76087 117 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 WNT2P09544 360 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 GAGE12FP0CL80 117 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 GAGE12GP0CL81 117 aa4.78□□□□□ -1.64
LINC01538-201ENST00000588074 GAGE12IP0CL82 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms