RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
PRPF8-208ENST00000573716 ING4Q9UNL4 249 aa9.31□□□□□ -0.92
PRPF8-208ENST00000573716 ARL2BPQ9Y2Y0 163 aa9.31□□□□□ -0.92
PRPF8-208ENST00000573716 AQP12BA6NM10 295 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 GEMIN2O14893 280 aaKnown RBP9.3□□□□□ -0.92
PRPF8-208ENST00000573716 RGS11O94810 467 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 BRI3O95415 125 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 TRGV3P03979 118 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 FSTP19883 344 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 CD40LGP29965 261 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
PRPF8-208ENST00000573716 TMEM267Q0VDI3 215 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-208ENST00000573716 RAB40BQ12829 278 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 PMS2P11Q13670 270 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 ACTBL2Q562R1 376 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 UNQ5815/PRO19632Q6UWF5 114 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 PPP1R27Q86WC6 154 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 AQP12AQ8IXF9 295 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 OR52N1Q8NH53 320 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 NRBF2Q96F24 287 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 NSL1Q96IY1 281 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
PRPF8-208ENST00000573716 FBXL15Q9H469 300 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 ZNF355PQ9NSJ1 428 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 DHDHQ9UQ10 334 aa9.3□□□□□ -0.92
PRPF8-208ENST00000573716 FRAS1Q86XX4 4008 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 OR4C45A6NMZ5 311 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 SLC16A6O15403 523 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 HBZP02008 142 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 MT-ND4P03905 459 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 HOXB6P17509 224 aaKnown RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 RAB3AP20336 220 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 SERPINA2P20848 420 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ZP3P21754 424 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 CCR9P51686 369 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 CX3CL1P78423 397 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ALKBH1Q13686 389 aaKnown RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 Q3ZCU0 254 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 C19orf54Q5BKX5 351 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 LCN12Q6JVE5 192 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 PYHIN1Q6K0P9 492 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 FDX2Q6P4F2 183 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ZNF497Q6ZNH5 498 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 KCTD20Q7Z5Y7 419 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 OR51A2Q8NGJ7 313 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 RFKQ969G6 155 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 CLCC1Q96S66 551 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 S100A13Q99584 98 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 THTPAQ9BU02 230 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ST6GALNAC5Q9BVH7 336 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 METTL9Q9H1A3 318 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 ZNF446Q9NWS9 450 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 CNOT2Q9NZN8 540 aaKnown RBP9.29□□□□□ -0.92
PRPF8-208ENST00000573716 RNF150Q9ULK6 438 aa9.29□□□□□ -0.92
PRPF8-208ENST00000573716 C13orf42A0A1B0GVH6 325 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 SHISA3A0PJX4 238 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 OR3A3P47888 321 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 SYNJ2BPP57105 145 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 CD81P60033 236 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 GNMTQ14749 295 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 LFNGQ8NES3 379 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 OR9G4Q8NGQ1 327 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 PELI1Q96FA3 418 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 C4orf36Q96KX1 117 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 RHOVQ96L33 236 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 RDH12Q96NR8 316 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 NABP2Q9BQ15 211 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 ABHD14AQ9BUJ0 271 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 RANGRFQ9HD47 186 aaPredicted RBP9.28□□□□□ -0.92
PRPF8-208ENST00000573716 OR2S2Q9NQN1 319 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 ETAA1Q9NY74 926 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 GAB2Q9UQC2 676 aa9.28□□□□□ -0.92
PRPF8-208ENST00000573716 FCN1O00602 326 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 TPPPO94811 219 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 CNIH1O95406 144 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 EGR2P11161 476 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 SOX2P48431 317 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 ADARB1P78563 741 aaKnown RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 FLOT2Q14254 428 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 FAM131AQ6UXB0 335 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 RPP25LQ8N5L8 163 aaKnown RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 PARP16Q8N5Y8 322 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 NPBQ8NG41 125 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 OR52L2PQ8NGH6 319 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 RGP1Q92546 391 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 MRPS24Q96EL2 167 aaKnown RBP9.27□□□□□ -0.93
PRPF8-208ENST00000573716 RIBC2Q9H4K1 309 aa9.27□□□□□ -0.93
PRPF8-208ENST00000573716 IFT22Q9H7X7 185 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms