RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ZNF816Q0VGE8 651 aaPredicted RBP16.35■□□□□ 0.21
VTI1B-205ENST00000555543 PLA2G7Q13093 441 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 ABCA11PQ4W5N1 156 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 HES5Q5TA89 166 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 SLC25A48Q6ZT89 311 aaKnown RBP16.35■□□□□ 0.21
VTI1B-205ENST00000555543 OR8H3Q8N146 312 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 ST6GALNAC6Q969X2 333 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 AKR1E2Q96JD6 320 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 YTHDF1Q9BYJ9 559 aaKnown RBP16.35■□□□□ 0.21
VTI1B-205ENST00000555543 V9GY05 133 aa16.35■□□□□ 0.21
VTI1B-205ENST00000555543 TRDV1A0A1B0GX56 115 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 CCRL2O00421 344 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 PSMB9P28065 219 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 TMEM30BQ3MIR4 351 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 Q3ZCU0 254 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 ARSJQ5FYB0 599 aaPredicted RBP16.34■□□□□ 0.21
VTI1B-205ENST00000555543 CT45A1Q5HYN5 189 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 THNSL2Q86YJ6 484 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 FAM89BQ8N5H3 189 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 OR52L2PQ8NGH6 319 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 CT45A3Q8NHU0 189 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 FAM3DQ96BQ1 224 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 RAB9BQ9NP90 201 aa16.34■□□□□ 0.21
VTI1B-205ENST00000555543 IGHV3-72A0A0B4J1Y9 119 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 TRAV1-2A0A0B4J238 106 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 IGHV1-3A0A0C4DH29 117 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 LDLRAD4O15165 306 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 NAPSAO96009 420 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 FAM106CPP0CH98 169 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 CD28P10747 220 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 HMGN3Q15651 99 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 C2orf68Q2NKX9 166 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 C22orf42Q6IC83 251 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 ZNF554Q86TJ5 538 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 HDHD3Q9BSH5 251 aaPredicted RBP16.33■□□□□ 0.2
VTI1B-205ENST00000555543 URM1Q9BTM9 101 aaKnown RBP16.33■□□□□ 0.2
VTI1B-205ENST00000555543 MMP27Q9H306 513 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 OR2S2Q9NQN1 319 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 PLEKHJ1Q9NW61 149 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 KCNIP1Q9NZI2 227 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 MOB4Q9Y3A3 225 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 NOTCH1P46531 2555 aa16.33■□□□□ 0.2
VTI1B-205ENST00000555543 TMEM272A0A1B0GTI8 110 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 IGKV1D-33P01593 117 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 IGKV1-33P01594 117 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 GAPDHP04406 335 aaKnown RBP16.32■□□□□ 0.2
VTI1B-205ENST00000555543 LPLP06858 475 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 PPP1CCP36873 323 aaKnown RBP16.32■□□□□ 0.2
VTI1B-205ENST00000555543 TMEM50BP56557 158 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 HES1Q14469 280 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 HNF4GQ14541 408 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 C2orf76Q3KRA6 126 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 ZNF773Q6PK81 442 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 MOB3BQ86TA1 216 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 NR2C2APQ86WQ0 139 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 RTN4IP1Q8WWV3 396 aaPredicted RBP16.32■□□□□ 0.2
VTI1B-205ENST00000555543 RBMXL1Q96E39 390 aaKnown RBP16.32■□□□□ 0.2
VTI1B-205ENST00000555543 STEAP1Q9UHE8 339 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 AK3Q9UIJ7 227 aa16.32■□□□□ 0.2
VTI1B-205ENST00000555543 FBXO24O75426 580 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 TMEM11P17152 192 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 GALP22466 123 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 MYL9P24844 172 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 IL3RAP26951 378 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 VEGFCP49767 419 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 ZNF137PP52743 207 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 MORN2Q502X0 79 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 LYG1Q8N1E2 194 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 FCGR1BQ92637 280 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 ARHGAP5-AS1Q96IT6 56 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 JPT1Q9UK76 154 aa16.31■□□□□ 0.2
VTI1B-205ENST00000555543 A0A0B4J203 849 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 SMIM30A4D0T7 59 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 IFITM5A6NNB3 132 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 PDCD5O14737 125 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 PEX14O75381 377 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 CSF1P09603 554 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 PSMD7P51665 324 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 HTD2P86397 168 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 EBI3Q14213 229 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 FAM110DQ8TAY7 271 aaPredicted RBP16.3■□□□□ 0.2
VTI1B-205ENST00000555543 CHMP1AQ9HD42 196 aaPredicted RBP16.3■□□□□ 0.2
VTI1B-205ENST00000555543 HSF4Q9ULV5 492 aa16.3■□□□□ 0.2
VTI1B-205ENST00000555543 ZNF736B4DX44 427 aaPredicted RBP16.29■□□□□ 0.2
VTI1B-205ENST00000555543 M0QZK8 103 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 RAB3BP20337 219 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 PLAC9Q5JTB6 97 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 C9orf152Q5JTZ5 239 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 IZUMO1Q8IYV9 350 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 C5orf56Q8N8D9 126 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 SETD6Q8TBK2 473 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 GALMQ96C23 342 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 ABHD14AQ9BUJ0 271 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 PECRQ9BY49 303 aa16.29■□□□□ 0.2
VTI1B-205ENST00000555543 TXNL4BQ9NX01 149 aaKnown RBP16.29■□□□□ 0.2
VTI1B-205ENST00000555543 TRBV6-6A0A0A6YYG2 114 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 ADARB2-AS1A8MUL3 147 aa16.28■□□□□ 0.2
VTI1B-205ENST00000555543 FGF9P31371 208 aaPredicted RBP16.28■□□□□ 0.2
VTI1B-205ENST00000555543 MOGAT2Q3SYC2 334 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms