RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 ARPC1AQ92747 370 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 C4orf36Q96KX1 117 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 Q96M66 194 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 TUBA4BQ9H853 241 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 SPACA1Q9HBV2 294 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 KCNIP1Q9NZI2 227 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 RNF150Q9ULK6 438 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 STUB1Q9UNE7 303 aa6.33□□□□□ -1.4
ACTN1-212ENST00000554158 A0A1W2PN81 502 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TCRBV3S1A0A5B6 114 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TRIM64CA6NLI5 447 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ZNF736B4DX44 427 aaPredicted RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 MCRIP1C9JLW8 97 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 G3V318 75 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 GABRPO00591 440 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ATP6V0E1O15342 81 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 NBR2O15453 112 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ATP8B1O43520 1251 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ZNF780AO75290 641 aaPredicted RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 IGHV4-30-4P0DP06 118 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 FCGR1AP12314 374 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ARSBP15848 533 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 EPHA2P29317 976 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 CHRNA7P36544 502 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 GBX2P52951 348 aaPredicted RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 RBM11P57052 281 aaKnown RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 NANOS3P60323 173 aaKnown RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 MRPL28Q13084 256 aaKnown RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 MPV17LQ2QL34 196 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TMEM177Q53S58 311 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 MEDAGQ5VYS4 303 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 KDM4DQ6B0I6 523 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 PYHIN1Q6K0P9 492 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 ACSM6Q6P461 480 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 SLC25A48Q6ZT89 311 aaKnown RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 GTSCR1Q86UQ5 136 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 MFSD4AQ8N468 514 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 PARP16Q8N5Y8 322 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TCTEX1D1Q8N7M0 179 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TMEM104Q8NE00 496 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 OR10V1Q8NGI7 309 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 OR52N1Q8NH53 320 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TRUB1Q8WWH5 349 aaKnown RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 CIB1Q99828 191 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 JAM3Q9BX67 310 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 KLK15Q9H2R5 256 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 PLSCR3Q9NRY6 295 aa6.32□□□□□ -1.4
ACTN1-212ENST00000554158 FOXA2Q9Y261 457 aaPredicted RBP6.32□□□□□ -1.4
ACTN1-212ENST00000554158 OR4C45A6NMZ5 311 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 HSPA12AO43301 675 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 SLC25A17O43808 307 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 LANCL1O43813 399 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 RGS11O94810 467 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 CDRT1O95170 752 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 HLA-DRB1P01911 266 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 HSPB1P04792 205 aaKnown RBP6.31□□□□□ -1.4
ACTN1-212ENST00000554158 LGALS1P09382 135 aaKnown RBP6.31□□□□□ -1.4
ACTN1-212ENST00000554158 GTF2F2P13984 249 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 ZNF93P35789 620 aaPredicted RBP6.31□□□□□ -1.4
ACTN1-212ENST00000554158 VEGFCP49767 419 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 ACTBP60709 375 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 LSAMPQ13449 338 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 GPR176Q14439 515 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 ATP6AP1Q15904 470 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 OR51A2Q8NGJ7 313 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 PELI1Q96FA3 418 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 TMED9Q9BVK6 235 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 GABARAPL1Q9H0R8 117 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 OR2S2Q9NQN1 319 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 ZNF355PQ9NSJ1 428 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 POMPQ9Y244 141 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 A3GALT2U3KPV4 340 aa6.31□□□□□ -1.4
ACTN1-212ENST00000554158 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 A0A087WW49 117 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 H0Y980 276 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 C15orf65H3BRN8 121 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 GEMIN2O14893 280 aaKnown RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 FADS2O95864 444 aaKnown RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 IGLV1-40P01703 118 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 IGHV3-11P01762 117 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 ZP3P21754 424 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 BLVRBP30043 206 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 PPIFP30405 207 aaKnown RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 SOX2P48431 317 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 MECP2P51608 486 aaKnown RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 ZNF137PP52743 207 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 TPPP2P59282 170 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 C5orf64Q2M2E5 130 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 SLC22A6Q4U2R8 563 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 ACTBL2Q562R1 376 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 SYT6Q5T7P8 510 aaPredicted RBP6.3□□□□□ -1.4
ACTN1-212ENST00000554158 DDI2Q5TDH0 399 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 ASPHD1Q5U4P2 390 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 STEAP3Q658P3 488 aa6.3□□□□□ -1.4
ACTN1-212ENST00000554158 FAM53AQ6NSI3 398 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms