RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FABP12A6NFH5 140 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 ADAP1O75689 374 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 CTSGP08311 255 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 GADD45AP24522 165 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 CRATP43155 626 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 GABARAPL2P60520 117 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 DEFA6Q01524 100 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 EXOC3L4Q17RC7 722 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 SLC13A5Q86YT5 568 aaPredicted RBP2.32□□□□□ -2.04
SYNE2-210ENST00000553455 MSRB3Q8IXL7 192 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 ZCCHC13Q8WW36 166 aaKnown RBP2.32□□□□□ -2.04
SYNE2-210ENST00000553455 GTSF1LQ9H1H1 148 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 WDR54Q9H977 334 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 CRB1P82279 1406 aa2.32□□□□□ -2.04
SYNE2-210ENST00000553455 TOP2AP11388 1531 aaKnown RBP2.32□□□□□ -2.04
SYNE2-210ENST00000553455 WIZO95785 1651 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 B4DEV8 164 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 H3BSA7 217 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 GOLGA8RI6L899 631 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 DENRO43583 198 aaKnown RBP2.31□□□□□ -2.04
SYNE2-210ENST00000553455 ORM1P02763 201 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 PSMA1P25786 263 aaKnown RBP2.31□□□□□ -2.04
SYNE2-210ENST00000553455 CRABP1P29762 137 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 GRPRP30550 384 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 GABRA3P34903 492 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 FUSP35637 526 aaKnown RBP eCLIP2.31□□□□□ -2.04
SYNE2-210ENST00000553455 SULT1A2P50226 295 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 UBE2G2P60604 165 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 SKP1P63208 163 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 BSPH1Q075Z2 132 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 TSPAN31Q12999 210 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 CST6Q15828 149 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 TRMT12Q53H54 448 aaKnown RBP2.31□□□□□ -2.04
SYNE2-210ENST00000553455 ZBTB8OSQ8IWT0 167 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 TMEM75Q8N9X5 138 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 ZNF514Q96K75 400 aaPredicted RBP2.31□□□□□ -2.04
SYNE2-210ENST00000553455 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 HIVEP2P31629 2446 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 CCDC88BA6NC98 1476 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 MYO5BQ9ULV0 1848 aa2.31□□□□□ -2.04
SYNE2-210ENST00000553455 LCTP09848 1927 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 K7EQS6 105 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 M0QYV0 167 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 ZNF73O43830 326 aaPredicted RBP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 FBP1P09467 338 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 ADORA1P30542 326 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 PSMB3P49720 205 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 GZMMP51124 257 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 C1DQ13901 141 aaKnown RBP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 LRRC26Q2I0M4 334 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 TCF24Q7RTU0 167 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 RIBC1Q8N443 379 aaPredicted RBP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 OR10P1Q8NGE3 313 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 MFSD8Q8NHS3 518 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 STOML3Q8TAV4 291 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 TNFAIP8L1Q8WVP5 186 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 EBNA1BP2Q99848 306 aaKnown RBP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 UPF3BQ9BZI7 483 aaKnown RBP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 LINC00527Q9UJ94 153 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 WASHC3Q9Y3C0 194 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 PUS1Q9Y606 427 aaKnown RBP eCLIP2.3□□□□□ -2.04
SYNE2-210ENST00000553455 RAD50Q92878 1312 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 ABCC8Q09428 1581 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 CEP170Q5SW79 1584 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 NESP48681 1621 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 DOCK6Q96HP0 2047 aa2.3□□□□□ -2.04
SYNE2-210ENST00000553455 LTBP2Q14767 1821 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 IGSF23A1L1A6 192 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 C17orf98A8MV24 154 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 FTCDNL1E5RQL4 147 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 AGTR1P30556 359 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 CLDN12P56749 244 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 SPATA31B1PQ5VZV4 182 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 Q6ZRU5 148 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 TMPPEQ6ZT21 453 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 OR52E4Q8NGH9 312 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 SMIM12Q96EX1 92 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 UBQLN4Q9NRR5 601 aa2.29□□□□□ -2.04
SYNE2-210ENST00000553455 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
SYNE2-210ENST00000553455 COL18A1P39060 1754 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 LOC102725191A0A1B0GVB3 256 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 GOLGA6L10A6NI86 522 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 F5H5T6 163 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 G3V3Q6 166 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 PET100P0DJ07 73 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 F8A1P23610 371 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 MAPK14Q16539 360 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 MESTQ5EB52 335 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 RBP7Q96R05 134 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 C7orf50Q9BRJ6 194 aaKnown RBP2.28□□□□□ -2.04
SYNE2-210ENST00000553455 C1QTNF6Q9BXI9 259 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 KMT2EQ8IZD2 1858 aa2.28□□□□□ -2.04
SYNE2-210ENST00000553455 THOC2Q8NI27 1593 aaKnown RBP2.27□□□□□ -2.05
SYNE2-210ENST00000553455 FANCD2Q9BXW9 1451 aa2.27□□□□□ -2.05
SYNE2-210ENST00000553455 MRC2Q9UBG0 1479 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms