RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 TMEM11P17152 192 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 SRMP19623 302 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 CRHBPP24387 322 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 IL3RAP26951 378 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 TPBGQ13641 420 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 HES1Q14469 280 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 C9orf152Q5JTZ5 239 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
BRF1-220ENST00000552127 OR5AU1Q8NGC0 362 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 TMEM203Q969S6 136 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 CCDC90BQ9GZT6 254 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 ISYNA1Q9NPH2 558 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 IGHV1-3A0A0C4DH29 117 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 HBZP02008 142 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 GAPDHP04406 335 aaKnown RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 HSMCR30P0CW71 290 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 RCC1P18754 421 aaPredicted RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 HTR2CP28335 458 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 HOXD3P31249 432 aaPredicted RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 REG1BP48304 166 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 RPS25P62851 125 aaKnown RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 MLLT11Q13015 90 aaPredicted RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 TRAM1Q15629 374 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 OR10K2Q6IF99 312 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 PRSS48Q7RTY5 328 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 PRR18Q8N4B5 295 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 ZNF439Q8NDP4 499 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 OR1L1Q8NH94 360 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 MRPL30Q8TCC3 161 aaKnown RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 KCNK15Q9H427 330 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
BRF1-220ENST00000552127 GNG12Q9UBI6 72 aa12.22□□□□□ -0.45
BRF1-220ENST00000552127 SLC22A1O15245 554 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 SLC31A2O15432 143 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 FGF16O43320 207 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 BPNT1O95861 308 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 CD37P11049 281 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 CPEP16870 476 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 PSMA1P25786 263 aaKnown RBP12.21□□□□□ -0.45
BRF1-220ENST00000552127 CHATP28329 748 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 CD83Q01151 205 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 UNC119Q13432 240 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 TMEM91Q6ZNR0 172 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 SLC25A48Q6ZT89 311 aaKnown RBP12.21□□□□□ -0.45
BRF1-220ENST00000552127 MOB3BQ86TA1 216 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 ZNF554Q86TJ5 538 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 OR6M1Q8NGM8 313 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 KCNG3Q8TAE7 436 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 RTN4IP1Q8WWV3 396 aaPredicted RBP12.21□□□□□ -0.45
BRF1-220ENST00000552127 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 CNBD2Q96M20 576 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 NEDD4LQ96PU5 975 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.45
BRF1-220ENST00000552127 PCLOQ9Y6V0 5065 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 TXNL1O43396 289 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 ARL6IP5O75915 188 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 MAP2K4P45985 399 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 ZNF137PP52743 207 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 EBI3Q14213 229 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 HNF4GQ14541 408 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
BRF1-220ENST00000552127 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 RCC1LQ96I51 464 aaKnown RBP12.2□□□□□ -0.46
BRF1-220ENST00000552127 MGLLQ99685 303 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 NICN1Q9BSH3 213 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 TM2D1Q9BX74 207 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 BLOC1S6Q9UL45 172 aa12.2□□□□□ -0.46
BRF1-220ENST00000552127 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 A0A1W2PRX2 142 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 TMEM14DPA8MWL7 114 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 QRFPP83859 136 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
BRF1-220ENST00000552127 GNMTQ14749 295 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 CT45A1Q5HYN5 189 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 C6orf201Q7Z4U5 140 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 Q8N6K4 173 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 CT45A3Q8NHU0 189 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
BRF1-220ENST00000552127 GFI1Q99684 422 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 PLGRKTQ9HBL7 147 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 RAB26Q9ULW5 256 aa12.19□□□□□ -0.46
BRF1-220ENST00000552127 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
BRF1-220ENST00000552127 TCRBV4S1A1TA0A5B7 111 aa12.18□□□□□ -0.46
BRF1-220ENST00000552127 SLC17A2O00624 439 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms