RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ACOX3O15254 700 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SLC37A4O43826 429 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 PDCD6O75340 191 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 IGLV1-47P01700 117 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV3-11P01762 117 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SNRPAP09012 282 aaKnown RBP2.92□□□□□ -1.94
SCAF11-210ENST00000547654 CTXN2P0C2S0 81 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 KLK2P20151 261 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 RPS12P25398 132 aaKnown RBP2.92□□□□□ -1.94
SCAF11-210ENST00000547654 PSMA1P25786 263 aaKnown RBP2.92□□□□□ -1.94
SCAF11-210ENST00000547654 CRISP3P54108 245 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 VBP1P61758 197 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 GTF2BQ00403 316 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SMAGPQ0VAQ4 97 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 ACSM3Q53FZ2 586 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 GALNT10Q86SR1 603 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 TRAPPC5Q8IUR0 188 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 C11orf53Q8IXP5 236 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 GATD1Q8NB37 220 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 OR5D18Q8NGL1 313 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 OR1L1Q8NH94 360 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 DTD1Q8TEA8 209 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 ORAOV1Q8WV07 137 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 TWIST2Q8WVJ9 160 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 NEURL3Q96EH8 262 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SPACA5Q96QH8 159 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 OR2A5Q96R48 311 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 GGTLC1Q9BX51 225 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 MS4A6AQ9H2W1 248 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 OR52D1Q9H346 318 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 POMKQ9H5K3 350 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SLC2A9Q9NRM0 540 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 SLC22A13Q9Y226 551 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 A0A0G2JMZ2 1700 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 MGAMO43451 1857 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 MYO18BQ8IUG5 2567 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 WDFY3Q8IZQ1 3526 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 RAI1Q7Z5J4 1906 aaPredicted RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 NUP155O75694 1391 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 OTOFQ9HC10 1997 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 GBF1Q92538 1859 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CCL15-CCL14A0A0B4J2E2 113 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 A0A1W2PP18 115 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 PGPA6NDG6 321 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 OR5H1A6NKK0 313 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 C21orf140B9A014 251 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 LY6G6DO95868 133 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CYB5R3P00387 301 aaPredicted RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF688P0C7X2 276 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 ADRB3P13945 408 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 M6PRP20645 277 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CFL1P23528 166 aaKnown RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 IL3RAP26951 378 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 ELK4P28324 431 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 ADORA1P30542 326 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 AGTR1P30556 359 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 OMPP47874 163 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 FAM53BQ14153 422 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 TMED2Q15363 201 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 SPA17Q15506 151 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CCL15Q16663 113 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 SPOPLQ6IQ16 392 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 TNFAIP8L2Q6P589 184 aaPredicted RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CD200R1LQ6Q8B3 271 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 FAM19A5Q7Z5A7 132 aaPredicted RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 STX12Q86Y82 276 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 SCGB1C1Q8TD33 95 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 PPCDCQ96CD2 204 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 PDXPQ96GD0 296 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF649Q9BS31 505 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 TSGA10Q9BZW7 698 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 VCX3BQ9H321 246 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 RPP21Q9H633 154 aaKnown RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 PARP11Q9NR21 331 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 PRO0461Q9UI25 63 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 FARSAQ9Y285 508 aaKnown RBP2.91□□□□□ -1.94
SCAF11-210ENST00000547654 WSB1Q9Y6I7 421 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 SPTBN2O15020 2390 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 BRWD1Q9NSI6 2320 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 EVC2Q86UK5 1308 aa2.91□□□□□ -1.94
SCAF11-210ENST00000547654 CEP250Q9BV73 2442 aa2.9□□□□□ -1.94
SCAF11-210ENST00000547654 PTPN13Q12923 2485 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 COL4A6Q14031 1691 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 TRAV8-3A0A0A6YYJ7 113 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 IGHV3-64DA0A0J9YX35 117 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 A0A1W2PQL4 384 aaPredicted RBP2.9□□□□□ -1.95
SCAF11-210ENST00000547654 FAM183AA6NL82 134 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 C9JQL5 133 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 KCNK1O00180 336 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 UPK1AO00322 258 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 VAMP5O95183 116 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 OR5F1O95221 314 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 NSA2O95478 260 aaKnown RBP2.9□□□□□ -1.95
SCAF11-210ENST00000547654 OR56A5P0C7T3 313 aa2.9□□□□□ -1.95
SCAF11-210ENST00000547654 ZNF17P17021 662 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms