RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 LINC00574Q9H8X3 128 aa11.47□□□□□ -0.57
LTBR-209ENST00000541102 RAB18Q9NP72 206 aa11.47□□□□□ -0.57
LTBR-209ENST00000541102 TAS2R3Q9NYW6 316 aa11.47□□□□□ -0.57
LTBR-209ENST00000541102 TRAPPC2LQ9UL33 140 aa11.47□□□□□ -0.57
LTBR-209ENST00000541102 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 METTL21EPA6NDL7 271 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 CCDC160A6NGH7 325 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 VGLL3A8MV65 326 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 NPIPB11E5RHQ5 1161 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF182P17025 639 aaPredicted RBP11.46□□□□□ -0.57
LTBR-209ENST00000541102 HTR1DP28221 377 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 SCAND1P57086 179 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF260Q3ZCT1 412 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF880Q6PDB4 577 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 MAFIPQ8WZ33 124 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ARL11Q969Q4 196 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 KIRREL1Q96J84 757 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ABCG5Q9H222 651 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 MBNL3Q9NUK0 354 aaKnown RBP11.46□□□□□ -0.57
LTBR-209ENST00000541102 ZNF230Q9UIE0 474 aaPredicted RBP11.46□□□□□ -0.57
LTBR-209ENST00000541102 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.57
LTBR-209ENST00000541102 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 TRAV18A0A075B6X5 111 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 TMEM235A6NFC5 223 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 M0QZ24 198 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 F2RL2O00254 374 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 CTDSP2O14595 271 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 TOR1AO14656 332 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 TIMM23O14925 209 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 SSX5O60225 188 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 CA11O75493 328 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 HBZP02008 142 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 ELK1P19419 428 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 NFYBP25208 207 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 RANBP1P43487 201 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 KIR2DS4P43632 304 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 UBE2NLQ5JXB2 153 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 CCBE1Q6UXH8 406 aaPredicted RBP11.45□□□□□ -0.58
LTBR-209ENST00000541102 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 NUDCD2Q8WVJ2 157 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
LTBR-209ENST00000541102 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 MIXL1Q9H2W2 232 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 TAF9BQ9HBM6 251 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 RSL24D1Q9UHA3 163 aaKnown RBP11.45□□□□□ -0.58
LTBR-209ENST00000541102 TCF19Q9Y242 345 aa11.45□□□□□ -0.58
LTBR-209ENST00000541102 IGKV1D-8A0A087WSZ0 117 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 TRBV6-6A0A0A6YYG2 114 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 A6NDX4 124 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 H3BUI4 141 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 NOL3O60936 208 aaKnown RBP11.44□□□□□ -0.58
LTBR-209ENST00000541102 TMEM127O75204 238 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 LOXL3P58215 753 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 GNMTQ14749 295 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 PRR18Q8N4B5 295 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 ZNF596Q8TC21 504 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 CMSS1Q9BQ75 279 aaKnown RBP11.44□□□□□ -0.58
LTBR-209ENST00000541102 SLIRPQ9GZT3 109 aaKnown RBP11.44□□□□□ -0.58
LTBR-209ENST00000541102 CHMP1AQ9HD42 196 aaPredicted RBP11.44□□□□□ -0.58
LTBR-209ENST00000541102 Q9N2K0 584 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
LTBR-209ENST00000541102 TRRAPQ9Y4A5 3859 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 A0A1W2PPE3 182 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 LEUTXA8MZ59 168 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 ORC5O43913 435 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 FCGR3AP08637 254 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 GZMHP20718 246 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 CD24P25063 80 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 PRRX1P54821 245 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 HMGN3Q15651 99 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 HIST2H2BDQ6DRA6 164 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 RANBP3Q9H6Z4 567 aaPredicted RBP11.43□□□□□ -0.58
LTBR-209ENST00000541102 AUNIPQ9H7T9 357 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 C12orf4Q9NQ89 552 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
LTBR-209ENST00000541102 CCDC59Q9P031 241 aaKnown RBP11.43□□□□□ -0.58
LTBR-209ENST00000541102 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
LTBR-209ENST00000541102 IGKV1-6A0A0C4DH72 117 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 SERPINE3A8MV23 424 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 XRCC3O43542 346 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 SCTP09683 121 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 CD3GP09693 182 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 VSIG10L2P0DP72 767 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 DYNLT3P51808 116 aa11.42□□□□□ -0.58
LTBR-209ENST00000541102 ARFRP1Q13795 201 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms