RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 H3BN98 237 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SCGNO76038 276 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 BGLAPP02818 100 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 CSTBP04080 98 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 MMP7P09237 267 aaPredicted RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 CFHR2P36980 270 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 UCP3P55916 312 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SRSF4Q08170 494 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 EIF2B1Q14232 305 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 MS4A18Q3C1V0 323 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 LCN8Q6JVE9 175 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 MYPOPQ86VE0 399 aaPredicted RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 ANGPTL5Q86XS5 388 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 ZNF679Q8IYX0 411 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 OR6T1Q8NGN1 323 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 VNN3Q9NY84 501 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SLC25A10Q9UBX3 287 aaPredicted RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 IER3IP1Q9Y5U9 82 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 RFNGQ9Y644 331 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 KPTNQ9Y664 436 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 YLPM1P49750 1951 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 IGLV3-9A0A075B6K5 115 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 TRAV27A0A087WT01 109 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SDHDO14521 159 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 PRODHO43272 600 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 IL6RP08887 468 aaPredicted RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 WNT2P09544 360 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 ZNF735P0CB33 412 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 STAG3L2P0CL84 134 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SULT1A3P0DMM9 295 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SULT1A4P0DMN0 295 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 NTF4P34130 210 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 OR1E2P47887 323 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 LDLRAD2Q5SZI1 272 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 TMUB2Q71RG4 321 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 RIMKLAQ8IXN7 391 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 ZNF101Q8IZC7 436 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 Q96M85 177 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 ZFP30Q9Y2G7 519 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 FBXO7Q9Y3I1 522 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 ADAM18Q9Y3Q7 739 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 TCRBV5S2A0A599 114 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 NPFFO15130 113 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 XRCC2O43543 280 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 NDUFA7O95182 113 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 IFNA21P01568 189 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 H1F0P07305 194 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 FGF7P21781 194 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 GATA4P43694 442 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 FAM27D1Q5T7N8 215 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 FAM24BQ8N5W8 94 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 HSD17B11Q8NBQ5 300 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 OR13C2Q8NGS9 318 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 LINC01006Q8NI28 216 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 ESM1Q9NQ30 184 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 SAMD4AQ9UPU9 718 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 CARHSP1Q9Y2V2 147 aaKnown RBP6.32□□□□□ -1.4
GNE-205ENST00000539815 RHBDD3Q9Y3P4 386 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 MMP24Q9Y5R2 645 aa6.32□□□□□ -1.4
GNE-205ENST00000539815 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 A0A096LNT2 108 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 DVL1O14640 695 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 CD5P06127 495 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 MMP16P51512 607 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 PPP3R1P63098 170 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 ASPHD2Q6ICH7 369 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 LINC00346Q8IVM7 164 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 OR6N2Q8NGY6 317 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 A4GNTQ9UNA3 340 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 ANKRD20A5PA0PJZ0 165 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 JTBO76095 146 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 C1QCP02747 245 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 CEBPGP53567 150 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 SPIBQ01892 262 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 IL18Q14116 193 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 EDDM3AQ14507 147 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 VMACQ2NL98 169 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 TMEM177Q53S58 311 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 MBNL2Q5VZF2 373 aaKnown RBP6.31□□□□□ -1.4
GNE-205ENST00000539815 ZNF705AQ6ZN79 300 aaPredicted RBP6.31□□□□□ -1.4
GNE-205ENST00000539815 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 OR4K13Q8NH42 304 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 HAVCR2Q8TDQ0 301 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 POM121L2Q96KW2 1035 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 S100A13Q99584 98 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 GINS4Q9BRT9 223 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 SELENOIQ9C0D9 397 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 CCL27Q9Y4X3 112 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 GZMBP10144 247 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 GABRR1P24046 479 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 UCP1P25874 307 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 SLC6A1P30531 599 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 SMIM21Q3B7S5 101 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 AKR1C8PQ5T2L2 129 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 Q6ZVH6 145 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 OR10W1Q8NGF6 305 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 THEM6Q8WUY1 208 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 TAF15Q92804 592 aaKnown RBP eCLIP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms