RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 H7C2G1 150 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 PRSS12P56730 875 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ZIC1Q15915 447 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 WDFY1Q8IWB7 410 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ZBTB34Q8NCN2 500 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ALG14Q96F25 216 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 GMPPAQ96IJ6 420 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 RSPO3Q9BXY4 272 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 TEPPQ6URK8 271 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 LINC00596Q86U02 117 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF665Q9H7R5 613 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 NKX2-6A6NCS4 301 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 LIPT2A6NK58 231 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 ADAD2Q8NCV1 583 aaKnown RBP8.71□□□□□ -1.01
COL4A6-208ENST00000538570 MRGPRFQ96AM1 343 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 A6NJY4 79 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 A6NNC1 897 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 CDX4O14627 284 aaPredicted RBP8.71□□□□□ -1.01
COL4A6-208ENST00000538570 PMCHL1Q16048 86 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 LHX8Q68G74 356 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 MOGAT3Q86VF5 341 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 OR1N2Q8NGR9 330 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 RNF7Q9UBF6 113 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 KCNMB2Q9Y691 235 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 CNTRLQ7Z7A1 2325 aa8.71□□□□□ -1.01
COL4A6-208ENST00000538570 MGAT2Q10469 447 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 RTP5Q14D33 572 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 ERASQ7Z444 233 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 ATG4DQ86TL0 474 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-208ENST00000538570 SLC25A40Q8TBP6 338 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 SCN7AQ01118 1682 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 TAF1P21675 1872 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 FFAR1O14842 300 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 ROM1Q03395 351 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 KLF9Q13886 244 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-208ENST00000538570 SPINK14Q6IE38 97 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM183AQ8IXX5 376 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 HARBI1Q96MB7 349 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 C11orf68Q9H3H3 251 aaKnown RBP8.71□□□□□ -1.02
COL4A6-208ENST00000538570 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.02
COL4A6-208ENST00000538570 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 A0A1B0GWB2 263 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 HOXA6P31267 233 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 MPLP40238 635 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF137PP52743 207 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM50BP56557 158 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 HERPUD1Q15011 391 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 PLPPR5Q32ZL2 321 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 NFAM1Q8NET5 270 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-208ENST00000538570 WNT2BQ93097 391 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 INSIG2Q9Y5U4 225 aa8.71□□□□□ -1.02
COL4A6-208ENST00000538570 CDIPTO14735 213 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 PITX3O75364 302 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 ID1P41134 155 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 SOX8P57073 446 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 LYZL2Q7Z4W2 148 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 VN1R4Q7Z5H5 301 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 OR2I1PQ8NGU4 316 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MRPL30Q8TCC3 161 aaKnown RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 VCX2Q9H322 139 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 SAP30LQ9HAJ7 183 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 CES1P1Q9UKY3 287 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 COX11Q9Y6N1 276 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MPTX1A8MV57 137 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 HOXD4P09016 255 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 SEC11BP0C7V7 166 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MMP9P14780 707 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 SPANXN1Q5VSR9 72 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MAFAQ8NHW3 353 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 TMUB1Q9BVT8 246 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 HEXA-AS1Q9H8Q6 139 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 JKAMPQ9P055 326 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 LAMB1P07942 1786 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 WNT5AP41221 380 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 ADIPOQQ15848 244 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF418Q8TF45 676 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 FAM222BQ8WU58 562 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 IGKV3-7A0A075B6H7 116 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 RPL36A-HNRNPH2H7BZ11 118 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 J3QT63 122 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 OR1L8Q8NGR8 309 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 ABHD3Q8WU67 409 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 PLA2G2FQ9BZM2 168 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 OR2H1Q9GZK4 316 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 RNF122Q9H9V4 155 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 ZDHHC8Q9ULC8 765 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 CISD3P0C7P0 127 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 HIST1H1BP16401 226 aaKnown RBP8.7□□□□□ -1.02
COL4A6-208ENST00000538570 PRNTQ86SH4 94 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 DEFB124Q8NES8 71 aa8.7□□□□□ -1.02
COL4A6-208ENST00000538570 HMGCLL1Q8TB92 370 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms