RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RCC1P18754 421 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZBTB25P24278 435 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GDNFP39905 211 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 EFNB2P52799 333 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GNG2P59768 71 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 HLA-DRB3P79483 266 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 HTD2P86397 168 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 PITPNAQ00169 270 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 HES1Q14469 280 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 HMGN3Q15651 99 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GPR107Q5VW38 600 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 C11orf88Q6PI97 169 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 BAIAP2L2Q6UXY1 529 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 C16orf82Q7Z2V1 217 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR8H3Q8N146 312 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 C8orf31Q8N9H6 132 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10V1Q8NGI7 309 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR13F1Q8NGS4 319 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR1L1Q8NH94 360 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR2T6Q8NHC8 308 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 C17orf50Q8WW18 174 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 EDARADDQ8WWZ3 215 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 KCTD12Q96CX2 325 aaKnown RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 OCSTAMPQ9BR26 566 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 ABHD14AQ9BUJ0 271 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 RANBP3Q9H6Z4 567 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 DIABLOQ9NR28 239 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 RHBDL2Q9NX52 303 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 SCOCQ9UIL1 159 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 PSG11Q9UQ72 335 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 TCF19Q9Y242 345 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 JMJD1CQ15652 2540 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 TRDCB7Z8K6 153 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 M0QZK8 103 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 MFNGO00587 321 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 TIMM23O14925 209 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 FABP7O15540 132 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 YPEL1O60688 119 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 GABARAPO95166 117 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 FCGR3AP08637 254 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 CLEC2LP0C7M8 214 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 DTYMKP23919 212 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SOX6P35712 828 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 PPP1CCP36873 323 aaKnown RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 COMPP49747 757 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 RORCP51449 518 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 VBP1P61758 197 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 NCS1P62166 190 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 PNLIPRP3Q17RR3 467 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 CDNFQ49AH0 187 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 AWAT1Q58HT5 328 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 PLAC9Q5JTB6 97 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 UBE2NLQ5JXB2 153 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 MZT2AQ6P582 158 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC25A48Q6ZT89 311 aaKnown RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 MOB3BQ86TA1 216 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 NR2C2APQ86WQ0 139 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 ANKRD13BQ86YJ7 626 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 TGIF2LXQ8IUE1 241 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 LYG1Q8N1E2 194 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 LINC00311Q8N616 119 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SAMD12Q8N8I0 201 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR52L2PQ8NGH6 319 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR4A4PQ8NGN8 299 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10J5Q8NHC4 309 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 ACOT12Q8WYK0 555 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC25A46Q96AG3 418 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 S100A16Q96FQ6 103 aaKnown RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 YPEL2Q96QA6 119 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 S1PR3Q99500 378 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 GINS4Q9BRT9 223 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 HDHD3Q9BSH5 251 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 GHITMQ9H3K2 345 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 RNF167Q9H6Y7 350 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 Q9N2K0 584 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 C1RLQ9NZP8 487 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 PIPOXQ9P0Z9 390 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC23A1Q9UHI7 598 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 SPATA2Q9UM82 520 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 RBM7Q9Y580 266 aaKnown RBP4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 ARHGAP32A7KAX9 2087 aa4.36□□□□□ -1.71
HMGB1P40-201ENST00000525121 WNK2Q9Y3S1 2297 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 TRAV18A0A075B6X5 111 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 SMIM31A0A1B0GVY4 71 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A1W2PPE3 182 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 CLPSL1A2RUU4 121 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 A6NDX4 124 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 FOXI3A8MTJ6 420 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 LY6LH3BQJ8 138 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAB27BO00194 218 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAB29O14966 203 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 BET1O15155 118 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 LANCL1O43813 399 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR2F2O95006 317 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 DIRAS3O95661 229 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 CTXN2P0C2S0 81 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 TMEM11P17152 192 aa4.35□□□□□ -1.71
HMGB1P40-201ENST00000525121 MDKP21741 143 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms