RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ZNF436Q9C0F3 470 aaPredicted RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 LIME1Q9H400 295 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 CTSZQ9UBR2 303 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 SHPKQ9UHJ6 478 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 KIF25Q9UIL4 384 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 CSMD2Q7Z408 3487 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 ODAMA1E959 279 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 C9orf170A2RU37 121 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 A8MV72 311 aaPredicted RBP7.07□□□□□ -1.28
VAPB-206ENST00000520497 RNF223E7ERA6 249 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 GOSR2O14653 212 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 BET1O15155 118 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 SPINT2O43291 252 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 ADAM20O43506 726 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 SLC22A5O76082 557 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 RGS11O94810 467 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 PPYP01298 95 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 IFNA2P01563 188 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 SSTR2P30874 369 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 IL2RGP31785 369 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 GLIPR1P48060 266 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 TMEM33P57088 247 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 FXYD4P59646 89 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 CYCSP99999 105 aaKnown RBP7.07□□□□□ -1.28
VAPB-206ENST00000520497 FGL1Q08830 312 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 PPP1R1AQ13522 171 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 HERPUD1Q15011 391 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 HMGN3Q15651 99 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 CR1LQ2VPA4 569 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
VAPB-206ENST00000520497 LYPD2Q6UXB3 125 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 CMTM1Q8IZ96 169 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 TPRX1Q8N7U7 411 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 OR2AK2Q8NG84 335 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 OR11H7Q8NGC8 314 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 CASTOR1Q8WTX7 329 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 FAM216AQ8WUB2 273 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 MITD1Q8WV92 249 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 GALMQ96C23 342 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 TIMD4Q96H15 378 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 PDCD10Q9BUL8 212 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 OR6C3Q9NZP0 311 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 COMMD9Q9P000 198 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 OPN4Q9UHM6 478 aa7.07□□□□□ -1.28
VAPB-206ENST00000520497 RBM7Q9Y580 266 aaKnown RBP7.07□□□□□ -1.28
VAPB-206ENST00000520497 CCDC168Q8NDH2 2452 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 TEP1Q99973 2627 aaKnown RBP7.06□□□□□ -1.28
VAPB-206ENST00000520497 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 OR5H14A6NHG9 310 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 RNF212BA8MTL3 300 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 NPIPB11E5RHQ5 1161 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 F5H0A9 414 aaPredicted RBP7.06□□□□□ -1.28
VAPB-206ENST00000520497 PPIHO43447 177 aaKnown RBP7.06□□□□□ -1.28
VAPB-206ENST00000520497 B3GALNT1O75752 331 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 SFT2D2O95562 160 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 IFNA21P01568 189 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 SCTP09683 121 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 CGB3P0DN86 165 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 CGB7P0DN87 165 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 GZMHP20718 246 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 AADACP22760 399 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 ZBTB25P24278 435 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 LUMP51884 338 aaPredicted RBP7.06□□□□□ -1.28
VAPB-206ENST00000520497 DHODHQ02127 395 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 BAMBIQ13145 260 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 EDDM3AQ14507 147 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 TMEM30BQ3MIR4 351 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 IGSF11Q5DX21 431 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 AVPI1Q5T686 147 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 AADACL3Q5VUY0 350 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 ZNF841Q6ZN19 808 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 C5orf24Q7Z6I8 188 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 NOXA1Q86UR1 476 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 FGFRL1Q8N441 504 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 ZNF525Q8N782 197 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 OR52B4Q8NGK2 314 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 OR13A1Q8NGR1 328 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 CAPSLQ8WWF8 208 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 IL1F10Q8WWZ1 152 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 NRGNQ92686 78 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 RAB1CQ92928 201 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 MRGPRFQ96AM1 343 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 SUCNR1Q9BXA5 334 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 GSX2Q9BZM3 304 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 FXYD6Q9H0Q3 95 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 C5orf66Q9H5L9 145 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 TAF9BQ9HBM6 251 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 SLC25A10Q9UBX3 287 aaPredicted RBP7.06□□□□□ -1.28
VAPB-206ENST00000520497 LPAR3Q9UBY5 353 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 OR2W1Q9Y3N9 320 aa7.06□□□□□ -1.28
VAPB-206ENST00000520497 TRBV6-7A0A0A0MS04 114 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 TRAV39A0A0B4J263 110 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 C12orf77C9JDV5 145 aa7.05□□□□□ -1.28
VAPB-206ENST00000520497 C15orf65H3BRN8 121 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms