RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LANCL1O43813 399 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 RAB3AP20336 220 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 RBM11P57052 281 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 LRRC36Q1X8D7 754 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 ZNF497Q6ZNH5 498 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 OR52N1Q8NH53 320 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 MRPL20Q9BYC9 149 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 TUBA4BQ9H853 241 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 DHDHQ9UQ10 334 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 FOXA2Q9Y261 457 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 CSTBP04080 98 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 SYT6Q5T7P8 510 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 OR4K15Q8NH41 348 aa15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 IL17DQ8TAD2 202 aa15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 TSEN15Q8WW01 171 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 PDCD1LG2Q9BQ51 273 aa15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 RIBC2Q9H4K1 309 aa15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 ERGIC3Q9Y282 383 aa15.54■□□□□ 0.08
SQSTM1-215ENST00000514093 RBMY1BA6NDE4 496 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 RBMY1EA6NEQ0 496 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 SPINT2O43291 252 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 HBZP02008 142 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 RBMY1DP0C7P1 496 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 SERPINA2P20848 420 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 ADARB1P78563 741 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 C5orf24Q7Z6I8 188 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 ABHD5Q8WTS1 349 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 CPNE2Q96FN4 548 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 CST11Q9H112 138 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 METTL9Q9H1A3 318 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 ISG20L2Q9H9L3 353 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 TAS2R4Q9NYW5 299 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 TRAPPC2LQ9UL33 140 aa15.53■□□□□ 0.08
SQSTM1-215ENST00000514093 A0A1W2PP11 408 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 EGR2P11161 476 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 SOX2P48431 317 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 GNMTQ14749 295 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 LHFPL3Q86UP9 236 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 ODF3L1Q8IXM7 274 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 NPBQ8NG41 125 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 NABP2Q9BQ15 211 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 FAM103A1Q9BTL3 118 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 FBXL15Q9H469 300 aa15.52■□□□□ 0.08
SQSTM1-215ENST00000514093 E9PI62 339 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 FCN1O00602 326 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 RCC1P18754 421 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 TPPP2P59282 170 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 CX3CL1P78423 397 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 NHLRC3Q5JS37 347 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 ZNF529Q6P280 563 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 ZDHHC13Q8IUH4 622 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 STX19Q8N4C7 294 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 OR5AK2Q8NH90 309 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 RHOVQ96L33 236 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 GABARAPL1Q9H0R8 117 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 HIPK2Q9H2X6 1198 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 ENOPH1Q9UHY7 261 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 POMPQ9Y244 141 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 NUBP2Q9Y5Y2 271 aa15.51■□□□□ 0.07
SQSTM1-215ENST00000514093 NDUFA3O95167 84 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 OR3A3P47888 321 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 RAB40BQ12829 278 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 ATP6AP1Q15904 470 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 MORN2Q502X0 79 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 ACTBL2Q562R1 376 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 ZNF660Q6AZW8 331 aaPredicted RBP15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 AMIGO2Q86SJ2 522 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 ACBD7Q8N6N7 88 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 OR52L2PQ8NGH6 319 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 CYYR1Q96J86 154 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 OR2S2Q9NQN1 319 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 CNOT2Q9NZN8 540 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 GAB2Q9UQC2 676 aa15.5■□□□□ 0.07
SQSTM1-215ENST00000514093 RGS11O94810 467 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 SNRPBP14678 240 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 CRIP2P52943 208 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 MPV17LQ2QL34 196 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 STEAP3Q658P3 488 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 UNQ5815/PRO19632Q6UWF5 114 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 LINC00596Q86U02 117 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 LINC00476Q8WZB0 136 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 S100A13Q99584 98 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 THAP7Q9BT49 309 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 ABHD14AQ9BUJ0 271 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 ALG8Q9BVK2 526 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 ETAA1Q9NY74 926 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 IL36GQ9NZH8 169 aa15.49■□□□□ 0.07
SQSTM1-215ENST00000514093 PCLOQ9Y6V0 5065 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 ANKRD34BA5PLL1 514 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 TMEM212A6NML5 194 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 H0Y980 276 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 SLC25A17O43808 307 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 LY6G6CO95867 125 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 RPSAP08865 295 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 PPP1CCP36873 323 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 TMEM267Q0VDI3 215 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 PLGLAQ15195 96 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 SLC22A6Q4U2R8 563 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 C6orf183Q5T699 404 aa15.48■□□□□ 0.07
SQSTM1-215ENST00000514093 IL34Q6ZMJ4 242 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms