RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 NDRG3Q9UGV2 375 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 ZNF716A6NP11 495 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 NTN3O00634 580 aaPredicted RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 CYTIPO60759 359 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 MBP02144 154 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 CTXN2P0C2S0 81 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 SMIM6P0DI80 62 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 MUC1P15941 1255 aaPredicted RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 RTBDNQ9BSG5 229 aaPredicted RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 RSG1Q9BU20 258 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 SERTAD4Q9NUC0 356 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 TMED3Q9Y3Q3 217 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 SETD2Q9BYW2 2564 aaPredicted RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 COX5BP10606 129 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 TLE4Q04727 773 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 ZNF818PQ6ZRF7 136 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 PUSL1Q8N0Z8 303 aaKnown RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 ZCCHC24Q8N2G6 241 aaKnown RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 OR5B12Q96R08 314 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 UNKLQ9H9P5 680 aaKnown RBP10.24□□□□□ -0.77
PRDM16-207ENST00000512462 MTCH1Q9NZJ7 389 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 LPAR3Q9UBY5 353 aa10.24□□□□□ -0.77
PRDM16-207ENST00000512462 MKRN2OSH3BPM6 223 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 TAAR5O14804 337 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 IFNA1P01562 189 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 MELTFP08582 738 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 GFRALQ6UXV0 394 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 GGNQ86UU5 652 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 OR1L1Q8NH94 360 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 TMEM230Q96A57 120 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 GAB2Q9UQC2 676 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 LOC102723996A0A087X1L8 192 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 hCG_38984A0A1B0GV85 526 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 hCG_1809904A0A1W2PP81 198 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 A0A1W2PR64 198 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 A0A1W2PRV1 198 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 TRDCB7Z8K6 153 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 H0YL77 283 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 HAND1O96004 215 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 NPBWR1P48145 328 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 EWSR1Q01844 656 aaKnown RBP eCLIP10.23□□□□□ -0.77
PRDM16-207ENST00000512462 PRB3Q04118 309 aaPredicted RBP10.23□□□□□ -0.77
PRDM16-207ENST00000512462 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 FAHD2BQ6P2I3 314 aaPredicted RBP10.23□□□□□ -0.77
PRDM16-207ENST00000512462 ADAMTS17Q8TE56 1095 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 NABP1Q96AH0 204 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 FAHD2AQ96GK7 314 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 PPP1R14DQ9NXH3 145 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 OR2C1O95371 312 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 OR2H2O95918 312 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
PRDM16-207ENST00000512462 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 CEACAM21Q3KPI0 293 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 TMEM204Q9BSN7 226 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 CLN8Q9UBY8 286 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 LRP4O75096 1905 aa10.23□□□□□ -0.77
PRDM16-207ENST00000512462 FAM90A27PA6NNH2 459 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 RPL36A-HNRNPH2H7BZ11 118 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 FBP1P09467 338 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 ZNF708P17019 499 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 REG1BP48304 166 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 RNF166Q96A37 237 aaPredicted RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 OR4F4Q96R69 305 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 REG4Q9BYZ8 158 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 PNRC2Q9NPJ4 139 aaKnown RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 A0A1W2PPE2 198 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 TMEM30CPA0ZSE6 113 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 TCAPO15273 167 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 IGHV2-70P01814 119 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 ACP1P24666 158 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 ATP6V0CP27449 155 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 HIST2H3AQ71DI3 136 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 OR5A2Q8NGI9 324 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 RND1Q92730 232 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 ARV1Q9H2C2 271 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 DLL3Q9NYJ7 618 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 NPIPB13A6NJU9 1138 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 OR5B21A6NL26 309 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 ZNF727A8MUV8 499 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 NPIPB4C9JG80 1138 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 J3QT63 122 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 TMPRSS2O15393 492 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 UCP2P55851 309 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 FOXO1Q12778 655 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 FAM166AQ6J272 317 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 FAM214BQ7L5A3 538 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 DTD1Q8TEA8 209 aa10.22□□□□□ -0.77
PRDM16-207ENST00000512462 BSCL2Q96G97 398 aaPredicted RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 RIMS4Q9H426 269 aaPredicted RBP10.22□□□□□ -0.77
PRDM16-207ENST00000512462 RNF212BA8MTL3 300 aa10.21□□□□□ -0.77
PRDM16-207ENST00000512462 H7C1Q1 480 aa10.21□□□□□ -0.77
PRDM16-207ENST00000512462 ACTL6AO96019 429 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms