RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 IL24Q13007 206 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 PDCD1Q15116 288 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 CLEC9AQ6UXN8 241 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 RBMXL3Q8N7X1 1067 aaKnown RBP9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 HIST1H2AAQ96QV6 131 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 FBXO7Q9Y3I1 522 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 ATP23Q9Y6H3 246 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 KALRNO60229 2985 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 KMT2BQ9UMN6 2715 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 PRR14LQ5THK1 2151 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 INTS1Q8N201 2190 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 TRAPPC2LH3BP13 241 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 WRBO00258 174 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 HSPB1P04792 205 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 ACAA1P09110 424 aaPredicted RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 HAAOP46952 286 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 FHITP49789 147 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 IDH3GP51553 393 aaPredicted RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 GABRA6Q16445 453 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 IGSF11Q5DX21 431 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 NMSQ5H8A3 153 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 ZDHHC23Q8IYP9 409 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 OR5A2Q8NGI9 324 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 A0A1W2PPH5 198 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 CD300LBA8K4G0 201 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 AP4M1O00189 453 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 TNFSF13O75888 250 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 IGHV2-5P01817 119 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 POLR2GP62487 172 aaKnown RBP eCLIP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 AKR1C8PQ5T2L2 129 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 SEM1Q6ZVN7 128 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 RPRMLQ8N4K4 120 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 LILRB1Q8NHL6 650 aaPredicted RBP9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 SIRT7Q9NRC8 400 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 RNF150Q9ULK6 438 aa9.36□□□□□ -0.91
SH3RF1-203ENST00000508685 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 A0A1B0GU03 582 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 A6NLC8 198 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ADAM20O43506 726 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 C1QL1O75973 258 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF205O95201 554 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 OR2C1O95371 312 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 GLI4P10075 376 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ERVS71-1P61550 626 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 RPL23AP62750 156 aaKnown RBP9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 DAZAP2Q15038 168 aaPredicted RBP9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 IGFBP7Q16270 282 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 TBC1D28Q2M2D7 210 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF506Q5JVG8 444 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 OR2T2Q6IF00 324 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ETV3LQ6ZN32 361 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 SPACA3Q8IXA5 215 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 GAPTQ8N292 157 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 ATP5SQ99766 215 aa9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
SH3RF1-203ENST00000508685 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 B4DEV8 164 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SSSCA1O60232 199 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 AGFG2O95081 481 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 IFNA5P01569 189 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 OR13C7P0DN81 318 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 COX5AP20674 150 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 BCL3P20749 454 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 S100PP25815 95 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 PPP1CCP36873 323 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 AKR1C3P42330 323 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 TAS2R30P59541 319 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 FABP9Q0Z7S8 132 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 ADAM5Q6NVV9 412 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 Q6ZPA2 131 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF818PQ6ZRF7 136 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 STX12Q86Y82 276 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 FAM24BQ8N5W8 94 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SLAMF9Q96A28 289 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 OPN3Q9H1Y3 402 aaPredicted RBP9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 IL36RNQ9UBH0 155 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 OR5B21A6NL26 309 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 C3orf80F5H4A9 247 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SMPD2O60906 423 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SRP19P09132 144 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 CA6P23280 308 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 DYNLT3P51808 116 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 HEPN1Q6WQI6 88 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 SLC35E3Q7Z769 313 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF573Q86YE8 665 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms